Protein–RNA interactions for Protein: Q9BSH5

HDHD3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3Q9BSH5 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC13.42□□□□□ -0.26
HDHD3Q9BSH5 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
HDHD3Q9BSH5 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
HDHD3Q9BSH5 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC13.42□□□□□ -0.26
HDHD3Q9BSH5 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC13.42□□□□□ -0.26
HDHD3Q9BSH5 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
HDHD3Q9BSH5 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
HDHD3Q9BSH5 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC13.42□□□□□ -0.26
HDHD3Q9BSH5 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
HDHD3Q9BSH5 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
HDHD3Q9BSH5 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
HDHD3Q9BSH5 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC13.42□□□□□ -0.26
HDHD3Q9BSH5 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC13.42□□□□□ -0.26
HDHD3Q9BSH5 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
HDHD3Q9BSH5 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC13.42□□□□□ -0.26
HDHD3Q9BSH5 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC13.42□□□□□ -0.26
HDHD3Q9BSH5 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC13.42□□□□□ -0.26
HDHD3Q9BSH5 PARN-202ENST00000420015 2360 ntTSL 2 BASIC13.42□□□□□ -0.26
HDHD3Q9BSH5 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
HDHD3Q9BSH5 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC13.42□□□□□ -0.26
HDHD3Q9BSH5 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC13.42□□□□□ -0.26
HDHD3Q9BSH5 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
HDHD3Q9BSH5 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
HDHD3Q9BSH5 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
HDHD3Q9BSH5 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC13.41□□□□□ -0.26
HDHD3Q9BSH5 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC13.41□□□□□ -0.26
HDHD3Q9BSH5 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
HDHD3Q9BSH5 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
HDHD3Q9BSH5 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
HDHD3Q9BSH5 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
HDHD3Q9BSH5 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
HDHD3Q9BSH5 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
HDHD3Q9BSH5 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
HDHD3Q9BSH5 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
HDHD3Q9BSH5 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
HDHD3Q9BSH5 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
HDHD3Q9BSH5 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
HDHD3Q9BSH5 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
HDHD3Q9BSH5 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
HDHD3Q9BSH5 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
HDHD3Q9BSH5 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
HDHD3Q9BSH5 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
HDHD3Q9BSH5 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
HDHD3Q9BSH5 SMN2-210ENST00000511812 867 ntTSL 2 BASIC13.41□□□□□ -0.26
HDHD3Q9BSH5 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC13.41□□□□□ -0.26
HDHD3Q9BSH5 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
HDHD3Q9BSH5 AC243562.2-201ENST00000561247 970 ntBASIC13.41□□□□□ -0.26
HDHD3Q9BSH5 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC13.41□□□□□ -0.26
HDHD3Q9BSH5 PAM16-215ENST00000577031 548 ntTSL 4 BASIC13.41□□□□□ -0.26
HDHD3Q9BSH5 AP002472.1-201ENST00000577490 586 ntBASIC13.41□□□□□ -0.26
HDHD3Q9BSH5 AC061975.2-201ENST00000581722 295 ntBASIC13.41□□□□□ -0.26
HDHD3Q9BSH5 AC099522.2-201ENST00000607001 744 ntBASIC13.41□□□□□ -0.26
HDHD3Q9BSH5 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
HDHD3Q9BSH5 AL513190.1-201ENST00000621254 727 ntBASIC13.41□□□□□ -0.26
HDHD3Q9BSH5 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
HDHD3Q9BSH5 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC13.41□□□□□ -0.26
HDHD3Q9BSH5 AC007326.2-201ENST00000624224 7579 ntBASIC13.41□□□□□ -0.26
HDHD3Q9BSH5 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
HDHD3Q9BSH5 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
HDHD3Q9BSH5 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
HDHD3Q9BSH5 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC13.41□□□□□ -0.26
HDHD3Q9BSH5 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC13.41□□□□□ -0.26
HDHD3Q9BSH5 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC13.41□□□□□ -0.26
HDHD3Q9BSH5 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
HDHD3Q9BSH5 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
HDHD3Q9BSH5 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
HDHD3Q9BSH5 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
HDHD3Q9BSH5 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC13.41□□□□□ -0.26
HDHD3Q9BSH5 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
HDHD3Q9BSH5 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC13.4□□□□□ -0.26
HDHD3Q9BSH5 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
HDHD3Q9BSH5 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC13.4□□□□□ -0.26
HDHD3Q9BSH5 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
HDHD3Q9BSH5 HLA-A-201ENST00000376802 1334 ntBASIC13.4□□□□□ -0.26
HDHD3Q9BSH5 BSG-215ENST00000618006 1329 ntTSL 2 BASIC13.4□□□□□ -0.26
HDHD3Q9BSH5 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
HDHD3Q9BSH5 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
HDHD3Q9BSH5 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
HDHD3Q9BSH5 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC13.4□□□□□ -0.26
HDHD3Q9BSH5 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
HDHD3Q9BSH5 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC13.4□□□□□ -0.26
HDHD3Q9BSH5 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC13.4□□□□□ -0.26
HDHD3Q9BSH5 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC13.4□□□□□ -0.26
HDHD3Q9BSH5 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC13.4□□□□□ -0.26
HDHD3Q9BSH5 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC13.4□□□□□ -0.26
HDHD3Q9BSH5 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
HDHD3Q9BSH5 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC13.4□□□□□ -0.26
HDHD3Q9BSH5 AGAP7P-201ENST00000582299 2062 ntBASIC13.4□□□□□ -0.26
HDHD3Q9BSH5 AGAP14-201ENST00000624701 2060 ntBASIC13.4□□□□□ -0.26
HDHD3Q9BSH5 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC13.4□□□□□ -0.26
HDHD3Q9BSH5 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC13.4□□□□□ -0.26
HDHD3Q9BSH5 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC13.4□□□□□ -0.26
HDHD3Q9BSH5 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC13.4□□□□□ -0.26
HDHD3Q9BSH5 CICP23-201ENST00000605013 2741 ntBASIC13.4□□□□□ -0.26
HDHD3Q9BSH5 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
HDHD3Q9BSH5 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
HDHD3Q9BSH5 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
HDHD3Q9BSH5 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC13.4□□□□□ -0.26
HDHD3Q9BSH5 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
HDHD3Q9BSH5 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC13.4□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 75 ms