Protein–RNA interactions for Protein: Q8NEP7

KLHDC9, Kelch domain-containing protein 9, humanhuman

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC9Q8NEP7 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC17.22■□□□□ 0.35
KLHDC9Q8NEP7 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC17.22■□□□□ 0.35
KLHDC9Q8NEP7 TUBB3-215ENST00000625617 570 ntTSL 4 BASIC17.22■□□□□ 0.35
KLHDC9Q8NEP7 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
KLHDC9Q8NEP7 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
KLHDC9Q8NEP7 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
KLHDC9Q8NEP7 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
KLHDC9Q8NEP7 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
KLHDC9Q8NEP7 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC17.22■□□□□ 0.35
KLHDC9Q8NEP7 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
KLHDC9Q8NEP7 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC17.21■□□□□ 0.35
KLHDC9Q8NEP7 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
KLHDC9Q8NEP7 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC17.21■□□□□ 0.35
KLHDC9Q8NEP7 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
KLHDC9Q8NEP7 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
KLHDC9Q8NEP7 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC17.21■□□□□ 0.35
KLHDC9Q8NEP7 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
KLHDC9Q8NEP7 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
KLHDC9Q8NEP7 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
KLHDC9Q8NEP7 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
KLHDC9Q8NEP7 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
KLHDC9Q8NEP7 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
KLHDC9Q8NEP7 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
KLHDC9Q8NEP7 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
KLHDC9Q8NEP7 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC17.21■□□□□ 0.35
KLHDC9Q8NEP7 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC17.21■□□□□ 0.35
KLHDC9Q8NEP7 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC17.21■□□□□ 0.35
KLHDC9Q8NEP7 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC17.21■□□□□ 0.35
KLHDC9Q8NEP7 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
KLHDC9Q8NEP7 UPF3AP2-201ENST00000457924 1132 ntBASIC17.21■□□□□ 0.35
KLHDC9Q8NEP7 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC17.21■□□□□ 0.35
KLHDC9Q8NEP7 RERG-205ENST00000537647 935 ntTSL 2 BASIC17.21■□□□□ 0.35
KLHDC9Q8NEP7 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC17.21■□□□□ 0.35
KLHDC9Q8NEP7 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC17.21■□□□□ 0.35
KLHDC9Q8NEP7 AC138627.1-207ENST00000641560 1006 ntBASIC17.21■□□□□ 0.35
KLHDC9Q8NEP7 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
KLHDC9Q8NEP7 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
KLHDC9Q8NEP7 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC17.21■□□□□ 0.35
KLHDC9Q8NEP7 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
KLHDC9Q8NEP7 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
KLHDC9Q8NEP7 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
KLHDC9Q8NEP7 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
KLHDC9Q8NEP7 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
KLHDC9Q8NEP7 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
KLHDC9Q8NEP7 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
KLHDC9Q8NEP7 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
KLHDC9Q8NEP7 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.34
KLHDC9Q8NEP7 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.34
KLHDC9Q8NEP7 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC17.2■□□□□ 0.34
KLHDC9Q8NEP7 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
KLHDC9Q8NEP7 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
KLHDC9Q8NEP7 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
KLHDC9Q8NEP7 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
KLHDC9Q8NEP7 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
KLHDC9Q8NEP7 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
KLHDC9Q8NEP7 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
KLHDC9Q8NEP7 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
KLHDC9Q8NEP7 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
KLHDC9Q8NEP7 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
KLHDC9Q8NEP7 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
KLHDC9Q8NEP7 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC17.2■□□□□ 0.34
KLHDC9Q8NEP7 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
KLHDC9Q8NEP7 TSACC-208ENST00000481479 741 ntTSL 2 BASIC17.2■□□□□ 0.34
KLHDC9Q8NEP7 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC17.2■□□□□ 0.34
KLHDC9Q8NEP7 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC17.2■□□□□ 0.34
KLHDC9Q8NEP7 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC17.2■□□□□ 0.34
KLHDC9Q8NEP7 ENPP7P14-201ENST00000621765 1040 ntBASIC17.2■□□□□ 0.34
KLHDC9Q8NEP7 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
KLHDC9Q8NEP7 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
KLHDC9Q8NEP7 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
KLHDC9Q8NEP7 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
KLHDC9Q8NEP7 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
KLHDC9Q8NEP7 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
KLHDC9Q8NEP7 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
KLHDC9Q8NEP7 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
KLHDC9Q8NEP7 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
KLHDC9Q8NEP7 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
KLHDC9Q8NEP7 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
KLHDC9Q8NEP7 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC17.19■□□□□ 0.34
KLHDC9Q8NEP7 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
KLHDC9Q8NEP7 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
KLHDC9Q8NEP7 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
KLHDC9Q8NEP7 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC17.19■□□□□ 0.34
KLHDC9Q8NEP7 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC17.19■□□□□ 0.34
KLHDC9Q8NEP7 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
KLHDC9Q8NEP7 RPS15-201ENST00000233609 534 ntTSL 2 BASIC17.19■□□□□ 0.34
KLHDC9Q8NEP7 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
KLHDC9Q8NEP7 AC079178.1-201ENST00000420915 656 ntBASIC17.19■□□□□ 0.34
KLHDC9Q8NEP7 AC106786.1-201ENST00000442777 792 ntTSL 3 BASIC17.19■□□□□ 0.34
KLHDC9Q8NEP7 SEPT7P2-209ENST00000450436 601 ntTSL 4 BASIC17.19■□□□□ 0.34
KLHDC9Q8NEP7 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
KLHDC9Q8NEP7 AC083949.1-202ENST00000458490 552 ntTSL 3 BASIC17.19■□□□□ 0.34
KLHDC9Q8NEP7 TNNT1-203ENST00000536926 901 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
KLHDC9Q8NEP7 AC110285.1-205ENST00000572301 559 ntTSL 3 BASIC17.19■□□□□ 0.34
KLHDC9Q8NEP7 RPS15-205ENST00000586686 562 ntTSL 5 BASIC17.19■□□□□ 0.34
KLHDC9Q8NEP7 RPS15-208ENST00000591804 711 ntTSL 5 BASIC17.19■□□□□ 0.34
KLHDC9Q8NEP7 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
KLHDC9Q8NEP7 NDUFV2P1-201ENST00000596415 907 ntBASIC17.19■□□□□ 0.34
KLHDC9Q8NEP7 Z84492.1-201ENST00000606589 408 ntAPPRIS P1 TSL 3 BASIC17.19■□□□□ 0.34
KLHDC9Q8NEP7 AC244157.2-201ENST00000616239 1006 ntBASIC17.19■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms