Protein–RNA interactions for Protein: Q8IWA5

SLC44A2, Choline transporter-like protein 2, humanhuman

Predicted RBP Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A2Q8IWA5 AF228730.5-201ENST00000530288 346 ntBASIC15.16■□□□□ 0.02
SLC44A2Q8IWA5 CCND1-203ENST00000536559 553 ntTSL 3 BASIC15.16■□□□□ 0.02
SLC44A2Q8IWA5 RNF34-208ENST00000555076 593 ntTSL 3 BASIC15.16■□□□□ 0.02
SLC44A2Q8IWA5 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC15.16■□□□□ 0.02
SLC44A2Q8IWA5 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC15.16■□□□□ 0.02
SLC44A2Q8IWA5 FHL2-212ENST00000607522 759 ntTSL 2 BASIC15.16■□□□□ 0.02
SLC44A2Q8IWA5 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC15.16■□□□□ 0.02
SLC44A2Q8IWA5 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
SLC44A2Q8IWA5 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC15.16■□□□□ 0.02
SLC44A2Q8IWA5 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC15.16■□□□□ 0.02
SLC44A2Q8IWA5 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SLC44A2Q8IWA5 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SLC44A2Q8IWA5 FADS2-201ENST00000257261 2964 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
SLC44A2Q8IWA5 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
SLC44A2Q8IWA5 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SLC44A2Q8IWA5 AL589702.1-201ENST00000641229 1509 ntBASIC15.16■□□□□ 0.02
SLC44A2Q8IWA5 SBF1P1-201ENST00000444527 5631 ntBASIC15.16■□□□□ 0.02
SLC44A2Q8IWA5 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC15.16■□□□□ 0.02
SLC44A2Q8IWA5 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
SLC44A2Q8IWA5 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC15.16■□□□□ 0.02
SLC44A2Q8IWA5 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC15.16■□□□□ 0.02
SLC44A2Q8IWA5 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SLC44A2Q8IWA5 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC15.16■□□□□ 0.02
SLC44A2Q8IWA5 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SLC44A2Q8IWA5 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC15.16■□□□□ 0.02
SLC44A2Q8IWA5 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC15.15■□□□□ 0.02
SLC44A2Q8IWA5 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
SLC44A2Q8IWA5 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SLC44A2Q8IWA5 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC15.15■□□□□ 0.02
SLC44A2Q8IWA5 KCP-203ENST00000610776 5108 ntTSL 5 BASIC15.15■□□□□ 0.02
SLC44A2Q8IWA5 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SLC44A2Q8IWA5 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC15.15■□□□□ 0.02
SLC44A2Q8IWA5 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC15.15■□□□□ 0.02
SLC44A2Q8IWA5 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SLC44A2Q8IWA5 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC15.15■□□□□ 0.02
SLC44A2Q8IWA5 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
SLC44A2Q8IWA5 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC15.15■□□□□ 0.02
SLC44A2Q8IWA5 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC15.15■□□□□ 0.02
SLC44A2Q8IWA5 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SLC44A2Q8IWA5 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
SLC44A2Q8IWA5 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
SLC44A2Q8IWA5 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SLC44A2Q8IWA5 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
SLC44A2Q8IWA5 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC15.15■□□□□ 0.02
SLC44A2Q8IWA5 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC15.15■□□□□ 0.02
SLC44A2Q8IWA5 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC15.15■□□□□ 0.02
SLC44A2Q8IWA5 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC15.15■□□□□ 0.02
SLC44A2Q8IWA5 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC15.15■□□□□ 0.02
SLC44A2Q8IWA5 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SLC44A2Q8IWA5 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC15.15■□□□□ 0.02
SLC44A2Q8IWA5 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC15.15■□□□□ 0.02
SLC44A2Q8IWA5 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
SLC44A2Q8IWA5 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC15.15■□□□□ 0.02
SLC44A2Q8IWA5 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SLC44A2Q8IWA5 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC15.15■□□□□ 0.02
SLC44A2Q8IWA5 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC15.15■□□□□ 0.02
SLC44A2Q8IWA5 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC15.15■□□□□ 0.02
SLC44A2Q8IWA5 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC15.15■□□□□ 0.02
SLC44A2Q8IWA5 AC073389.1-201ENST00000595595 795 ntBASIC15.15■□□□□ 0.02
SLC44A2Q8IWA5 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC15.15■□□□□ 0.02
SLC44A2Q8IWA5 NKG7-205ENST00000600427 520 ntTSL 3 BASIC15.15■□□□□ 0.02
SLC44A2Q8IWA5 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
SLC44A2Q8IWA5 UXT-AS1-201ENST00000590504 1525 ntBASIC15.15■□□□□ 0.02
SLC44A2Q8IWA5 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SLC44A2Q8IWA5 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SLC44A2Q8IWA5 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
SLC44A2Q8IWA5 AC006058.4-201ENST00000624016 1670 ntBASIC15.15■□□□□ 0.02
SLC44A2Q8IWA5 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SLC44A2Q8IWA5 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
SLC44A2Q8IWA5 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC15.15■□□□□ 0.02
SLC44A2Q8IWA5 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SLC44A2Q8IWA5 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
SLC44A2Q8IWA5 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
SLC44A2Q8IWA5 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SLC44A2Q8IWA5 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC15.15■□□□□ 0.02
SLC44A2Q8IWA5 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
SLC44A2Q8IWA5 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC15.15■□□□□ 0.02
SLC44A2Q8IWA5 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
SLC44A2Q8IWA5 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC15.15■□□□□ 0.02
SLC44A2Q8IWA5 LINC02228-204ENST00000642115 2962 ntBASIC15.15■□□□□ 0.02
SLC44A2Q8IWA5 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC15.15■□□□□ 0.02
SLC44A2Q8IWA5 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SLC44A2Q8IWA5 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
SLC44A2Q8IWA5 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SLC44A2Q8IWA5 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SLC44A2Q8IWA5 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC15.14■□□□□ 0.01
SLC44A2Q8IWA5 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
SLC44A2Q8IWA5 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SLC44A2Q8IWA5 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC15.14■□□□□ 0.01
SLC44A2Q8IWA5 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
SLC44A2Q8IWA5 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SLC44A2Q8IWA5 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
SLC44A2Q8IWA5 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC15.14■□□□□ 0.01
SLC44A2Q8IWA5 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
SLC44A2Q8IWA5 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SLC44A2Q8IWA5 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SLC44A2Q8IWA5 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC15.14■□□□□ 0.01
SLC44A2Q8IWA5 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC15.14■□□□□ 0.01
SLC44A2Q8IWA5 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
SLC44A2Q8IWA5 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC15.14■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms