Protein–RNA interactions for Protein: Q86WT1

TTC30A, Tetratricopeptide repeat protein 30A, humanhuman

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC30AQ86WT1 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TTC30AQ86WT1 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC16.79■□□□□ 0.28
TTC30AQ86WT1 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TTC30AQ86WT1 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC16.79■□□□□ 0.28
TTC30AQ86WT1 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
TTC30AQ86WT1 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC16.79■□□□□ 0.28
TTC30AQ86WT1 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC16.79■□□□□ 0.28
TTC30AQ86WT1 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
TTC30AQ86WT1 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC16.79■□□□□ 0.28
TTC30AQ86WT1 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
TTC30AQ86WT1 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
TTC30AQ86WT1 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TTC30AQ86WT1 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TTC30AQ86WT1 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
TTC30AQ86WT1 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TTC30AQ86WT1 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TTC30AQ86WT1 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TTC30AQ86WT1 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
TTC30AQ86WT1 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
TTC30AQ86WT1 RAC2-202ENST00000401529 569 ntTSL 4 BASIC16.79■□□□□ 0.28
TTC30AQ86WT1 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TTC30AQ86WT1 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TTC30AQ86WT1 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
TTC30AQ86WT1 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC16.79■□□□□ 0.28
TTC30AQ86WT1 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC16.79■□□□□ 0.28
TTC30AQ86WT1 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TTC30AQ86WT1 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC16.79■□□□□ 0.28
TTC30AQ86WT1 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC16.79■□□□□ 0.28
TTC30AQ86WT1 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC16.79■□□□□ 0.28
TTC30AQ86WT1 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
TTC30AQ86WT1 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC16.79■□□□□ 0.28
TTC30AQ86WT1 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC16.79■□□□□ 0.28
TTC30AQ86WT1 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC16.79■□□□□ 0.28
TTC30AQ86WT1 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC16.79■□□□□ 0.28
TTC30AQ86WT1 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC16.79■□□□□ 0.28
TTC30AQ86WT1 TEX48-202ENST00000612244 662 ntTSL 3 BASIC16.79■□□□□ 0.28
TTC30AQ86WT1 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC16.79■□□□□ 0.28
TTC30AQ86WT1 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC16.79■□□□□ 0.28
TTC30AQ86WT1 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
TTC30AQ86WT1 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC16.79■□□□□ 0.28
TTC30AQ86WT1 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC16.79■□□□□ 0.28
TTC30AQ86WT1 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TTC30AQ86WT1 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
TTC30AQ86WT1 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TTC30AQ86WT1 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TTC30AQ86WT1 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TTC30AQ86WT1 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
TTC30AQ86WT1 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
TTC30AQ86WT1 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC16.79■□□□□ 0.28
TTC30AQ86WT1 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
TTC30AQ86WT1 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
TTC30AQ86WT1 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC16.78■□□□□ 0.28
TTC30AQ86WT1 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
TTC30AQ86WT1 PAUPAR-201ENST00000630360 2965 ntBASIC16.78■□□□□ 0.28
TTC30AQ86WT1 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TTC30AQ86WT1 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TTC30AQ86WT1 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TTC30AQ86WT1 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TTC30AQ86WT1 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC16.78■□□□□ 0.28
TTC30AQ86WT1 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC16.78■□□□□ 0.28
TTC30AQ86WT1 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC16.78■□□□□ 0.28
TTC30AQ86WT1 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TTC30AQ86WT1 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TTC30AQ86WT1 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TTC30AQ86WT1 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
TTC30AQ86WT1 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC16.78■□□□□ 0.28
TTC30AQ86WT1 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TTC30AQ86WT1 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC16.78■□□□□ 0.28
TTC30AQ86WT1 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC16.78■□□□□ 0.28
TTC30AQ86WT1 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC16.78■□□□□ 0.28
TTC30AQ86WT1 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC16.78■□□□□ 0.28
TTC30AQ86WT1 SPDYE18-201ENST00000510091 1050 ntBASIC16.78■□□□□ 0.28
TTC30AQ86WT1 SDHAP3-202ENST00000515467 728 ntBASIC16.78■□□□□ 0.28
TTC30AQ86WT1 RAB35-202ENST00000534951 939 ntTSL 2 BASIC16.78■□□□□ 0.28
TTC30AQ86WT1 PRR29-204ENST00000577953 565 ntTSL 4 BASIC16.78■□□□□ 0.28
TTC30AQ86WT1 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TTC30AQ86WT1 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TTC30AQ86WT1 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TTC30AQ86WT1 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TTC30AQ86WT1 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC16.78■□□□□ 0.28
TTC30AQ86WT1 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
TTC30AQ86WT1 AL596257.1-201ENST00000641463 2694 ntBASIC16.78■□□□□ 0.28
TTC30AQ86WT1 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TTC30AQ86WT1 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
TTC30AQ86WT1 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TTC30AQ86WT1 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TTC30AQ86WT1 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TTC30AQ86WT1 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
TTC30AQ86WT1 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
TTC30AQ86WT1 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TTC30AQ86WT1 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC16.78■□□□□ 0.28
TTC30AQ86WT1 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC16.77■□□□□ 0.28
TTC30AQ86WT1 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TTC30AQ86WT1 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
TTC30AQ86WT1 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TTC30AQ86WT1 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TTC30AQ86WT1 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC16.77■□□□□ 0.28
TTC30AQ86WT1 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
TTC30AQ86WT1 AC068418.2-201ENST00000577309 3703 ntBASIC16.77■□□□□ 0.28
TTC30AQ86WT1 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC16.77■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms