Protein–RNA interactions for Protein: Q7Z3V4

UBE3B, Ubiquitin-protein ligase E3B, humanhuman

Predictions only

Length 1,068 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3BQ7Z3V4 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC19.61■□□□□ 0.73
UBE3BQ7Z3V4 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
UBE3BQ7Z3V4 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC19.61■□□□□ 0.73
UBE3BQ7Z3V4 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
UBE3BQ7Z3V4 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
UBE3BQ7Z3V4 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
UBE3BQ7Z3V4 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
UBE3BQ7Z3V4 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
UBE3BQ7Z3V4 AL133267.1-201ENST00000398220 340 ntBASIC19.61■□□□□ 0.73
UBE3BQ7Z3V4 SOCS2P1-201ENST00000417727 557 ntBASIC19.61■□□□□ 0.73
UBE3BQ7Z3V4 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC19.61■□□□□ 0.73
UBE3BQ7Z3V4 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC19.61■□□□□ 0.73
UBE3BQ7Z3V4 AC015910.1-201ENST00000579400 975 ntBASIC19.61■□□□□ 0.73
UBE3BQ7Z3V4 AL359881.2-201ENST00000602973 570 ntBASIC19.61■□□□□ 0.73
UBE3BQ7Z3V4 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
UBE3BQ7Z3V4 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
UBE3BQ7Z3V4 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC19.61■□□□□ 0.73
UBE3BQ7Z3V4 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
UBE3BQ7Z3V4 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC19.61■□□□□ 0.73
UBE3BQ7Z3V4 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
UBE3BQ7Z3V4 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
UBE3BQ7Z3V4 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC19.61■□□□□ 0.73
UBE3BQ7Z3V4 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC19.61■□□□□ 0.73
UBE3BQ7Z3V4 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
UBE3BQ7Z3V4 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
UBE3BQ7Z3V4 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC19.61■□□□□ 0.73
UBE3BQ7Z3V4 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
UBE3BQ7Z3V4 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
UBE3BQ7Z3V4 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
UBE3BQ7Z3V4 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
UBE3BQ7Z3V4 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
UBE3BQ7Z3V4 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
UBE3BQ7Z3V4 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
UBE3BQ7Z3V4 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
UBE3BQ7Z3V4 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
UBE3BQ7Z3V4 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
UBE3BQ7Z3V4 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC19.6■□□□□ 0.73
UBE3BQ7Z3V4 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
UBE3BQ7Z3V4 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
UBE3BQ7Z3V4 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
UBE3BQ7Z3V4 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
UBE3BQ7Z3V4 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC19.6■□□□□ 0.73
UBE3BQ7Z3V4 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
UBE3BQ7Z3V4 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC19.6■□□□□ 0.73
UBE3BQ7Z3V4 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
UBE3BQ7Z3V4 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC19.6■□□□□ 0.73
UBE3BQ7Z3V4 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC19.6■□□□□ 0.73
UBE3BQ7Z3V4 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC19.6■□□□□ 0.73
UBE3BQ7Z3V4 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC19.6■□□□□ 0.73
UBE3BQ7Z3V4 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
UBE3BQ7Z3V4 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC19.6■□□□□ 0.73
UBE3BQ7Z3V4 CROCCP4-201ENST00000457096 498 ntBASIC19.6■□□□□ 0.73
UBE3BQ7Z3V4 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC19.6■□□□□ 0.73
UBE3BQ7Z3V4 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC19.6■□□□□ 0.73
UBE3BQ7Z3V4 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC19.6■□□□□ 0.73
UBE3BQ7Z3V4 AL512343.1-201ENST00000605837 169 ntBASIC19.6■□□□□ 0.73
UBE3BQ7Z3V4 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
UBE3BQ7Z3V4 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC19.6■□□□□ 0.73
UBE3BQ7Z3V4 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
UBE3BQ7Z3V4 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
UBE3BQ7Z3V4 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
UBE3BQ7Z3V4 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
UBE3BQ7Z3V4 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
UBE3BQ7Z3V4 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
UBE3BQ7Z3V4 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
UBE3BQ7Z3V4 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
UBE3BQ7Z3V4 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC19.6■□□□□ 0.73
UBE3BQ7Z3V4 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
UBE3BQ7Z3V4 TKT-202ENST00000423516 2075 ntTSL 2 BASIC19.6■□□□□ 0.73
UBE3BQ7Z3V4 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC19.59■□□□□ 0.73
UBE3BQ7Z3V4 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC19.59■□□□□ 0.73
UBE3BQ7Z3V4 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC19.59■□□□□ 0.73
UBE3BQ7Z3V4 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
UBE3BQ7Z3V4 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC19.59■□□□□ 0.73
UBE3BQ7Z3V4 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC19.59■□□□□ 0.73
UBE3BQ7Z3V4 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC19.59■□□□□ 0.73
UBE3BQ7Z3V4 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
UBE3BQ7Z3V4 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
UBE3BQ7Z3V4 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC19.59■□□□□ 0.73
UBE3BQ7Z3V4 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
UBE3BQ7Z3V4 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC19.59■□□□□ 0.73
UBE3BQ7Z3V4 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC19.59■□□□□ 0.73
UBE3BQ7Z3V4 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC19.59■□□□□ 0.73
UBE3BQ7Z3V4 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC19.59■□□□□ 0.73
UBE3BQ7Z3V4 TDH-203ENST00000531764 1110 ntBASIC19.59■□□□□ 0.73
UBE3BQ7Z3V4 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC19.59■□□□□ 0.73
UBE3BQ7Z3V4 ORC6-206ENST00000568364 888 ntTSL 5 BASIC19.59■□□□□ 0.73
UBE3BQ7Z3V4 PIGL-212ENST00000581006 554 ntTSL 4 BASIC19.59■□□□□ 0.73
UBE3BQ7Z3V4 AC017083.2-201ENST00000608069 979 ntBASIC19.59■□□□□ 0.73
UBE3BQ7Z3V4 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC19.59■□□□□ 0.73
UBE3BQ7Z3V4 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
UBE3BQ7Z3V4 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
UBE3BQ7Z3V4 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
UBE3BQ7Z3V4 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
UBE3BQ7Z3V4 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
UBE3BQ7Z3V4 F11R-206ENST00000621309 4770 ntTSL 5 BASIC19.59■□□□□ 0.73
UBE3BQ7Z3V4 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
UBE3BQ7Z3V4 BANP-204ENST00000393208 2283 ntTSL 2 BASIC19.59■□□□□ 0.73
UBE3BQ7Z3V4 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
UBE3BQ7Z3V4 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms