Protein–RNA interactions for Protein: Q6P2H8

TMEM53, Transmembrane protein 53, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53Q6P2H8 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
TMEM53Q6P2H8 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TMEM53Q6P2H8 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
TMEM53Q6P2H8 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TMEM53Q6P2H8 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC14.64□□□□□ -0.07
TMEM53Q6P2H8 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TMEM53Q6P2H8 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
TMEM53Q6P2H8 RFX2-222ENST00000592546 2578 ntAPPRIS ALT1 TSL 2 BASIC14.64□□□□□ -0.07
TMEM53Q6P2H8 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC14.64□□□□□ -0.07
TMEM53Q6P2H8 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
TMEM53Q6P2H8 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TMEM53Q6P2H8 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
TMEM53Q6P2H8 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TMEM53Q6P2H8 MIR940-201ENST00000401276 94 ntBASIC14.64□□□□□ -0.07
TMEM53Q6P2H8 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
TMEM53Q6P2H8 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC14.64□□□□□ -0.07
TMEM53Q6P2H8 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
TMEM53Q6P2H8 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC14.64□□□□□ -0.07
TMEM53Q6P2H8 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC14.64□□□□□ -0.07
TMEM53Q6P2H8 MTRF1LP2-201ENST00000506027 1122 ntBASIC14.64□□□□□ -0.07
TMEM53Q6P2H8 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC14.64□□□□□ -0.07
TMEM53Q6P2H8 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
TMEM53Q6P2H8 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC14.64□□□□□ -0.07
TMEM53Q6P2H8 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
TMEM53Q6P2H8 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
TMEM53Q6P2H8 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC14.64□□□□□ -0.07
TMEM53Q6P2H8 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TMEM53Q6P2H8 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
TMEM53Q6P2H8 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
TMEM53Q6P2H8 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
TMEM53Q6P2H8 AC006449.6-201ENST00000612330 2296 ntBASIC14.64□□□□□ -0.07
TMEM53Q6P2H8 RBM6-201ENST00000266022 3750 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TMEM53Q6P2H8 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TMEM53Q6P2H8 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC14.64□□□□□ -0.07
TMEM53Q6P2H8 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
TMEM53Q6P2H8 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
TMEM53Q6P2H8 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC14.64□□□□□ -0.07
TMEM53Q6P2H8 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC14.64□□□□□ -0.07
TMEM53Q6P2H8 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
TMEM53Q6P2H8 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
TMEM53Q6P2H8 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TMEM53Q6P2H8 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TMEM53Q6P2H8 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC14.64□□□□□ -0.07
TMEM53Q6P2H8 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
TMEM53Q6P2H8 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC14.64□□□□□ -0.07
TMEM53Q6P2H8 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
TMEM53Q6P2H8 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
TMEM53Q6P2H8 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
TMEM53Q6P2H8 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
TMEM53Q6P2H8 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
TMEM53Q6P2H8 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
TMEM53Q6P2H8 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
TMEM53Q6P2H8 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC14.63□□□□□ -0.07
TMEM53Q6P2H8 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC14.63□□□□□ -0.07
TMEM53Q6P2H8 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC14.63□□□□□ -0.07
TMEM53Q6P2H8 AL121992.1-201ENST00000428945 2845 ntTSL 2 BASIC14.63□□□□□ -0.07
TMEM53Q6P2H8 AC006486.2-201ENST00000624246 2199 ntBASIC14.63□□□□□ -0.07
TMEM53Q6P2H8 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC14.63□□□□□ -0.07
TMEM53Q6P2H8 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
TMEM53Q6P2H8 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TMEM53Q6P2H8 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
TMEM53Q6P2H8 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC14.63□□□□□ -0.07
TMEM53Q6P2H8 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TMEM53Q6P2H8 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
TMEM53Q6P2H8 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
TMEM53Q6P2H8 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
TMEM53Q6P2H8 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC14.63□□□□□ -0.07
TMEM53Q6P2H8 SMN2-210ENST00000511812 867 ntTSL 2 BASIC14.63□□□□□ -0.07
TMEM53Q6P2H8 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC14.63□□□□□ -0.07
TMEM53Q6P2H8 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC14.63□□□□□ -0.07
TMEM53Q6P2H8 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC14.63□□□□□ -0.07
TMEM53Q6P2H8 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
TMEM53Q6P2H8 AC018845.2-201ENST00000568326 409 ntBASIC14.63□□□□□ -0.07
TMEM53Q6P2H8 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC14.63□□□□□ -0.07
TMEM53Q6P2H8 AQP6-205ENST00000618286 829 ntTSL 5 BASIC14.63□□□□□ -0.07
TMEM53Q6P2H8 AC004877.2-201ENST00000623941 599 ntBASIC14.63□□□□□ -0.07
TMEM53Q6P2H8 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TMEM53Q6P2H8 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
TMEM53Q6P2H8 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
TMEM53Q6P2H8 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TMEM53Q6P2H8 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC14.63□□□□□ -0.07
TMEM53Q6P2H8 KRT8P39-201ENST00000396270 1433 ntBASIC14.63□□□□□ -0.07
TMEM53Q6P2H8 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC14.63□□□□□ -0.07
TMEM53Q6P2H8 AL161772.1-201ENST00000610494 4412 ntBASIC14.63□□□□□ -0.07
TMEM53Q6P2H8 AC006538.1-201ENST00000567905 1585 ntBASIC14.63□□□□□ -0.07
TMEM53Q6P2H8 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TMEM53Q6P2H8 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TMEM53Q6P2H8 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC14.63□□□□□ -0.07
TMEM53Q6P2H8 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
TMEM53Q6P2H8 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TMEM53Q6P2H8 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC14.63□□□□□ -0.07
TMEM53Q6P2H8 AC093668.2-201ENST00000481893 3569 ntTSL 2 BASIC14.63□□□□□ -0.07
TMEM53Q6P2H8 AC105052.1-201ENST00000519541 3569 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
TMEM53Q6P2H8 MYD88-203ENST00000417037 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
TMEM53Q6P2H8 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TMEM53Q6P2H8 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TMEM53Q6P2H8 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
TMEM53Q6P2H8 HARS-203ENST00000431330 1774 ntTSL 2 BASIC14.62□□□□□ -0.07
TMEM53Q6P2H8 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC14.62□□□□□ -0.07
TMEM53Q6P2H8 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms