Protein–RNA interactions for Protein: P61073

CXCR4, C-X-C chemokine receptor type 4, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4P61073 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CXCR4P61073 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CXCR4P61073 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CXCR4P61073 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CXCR4P61073 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC14.47□□□□□ -0.09
CXCR4P61073 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC14.47□□□□□ -0.09
CXCR4P61073 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CXCR4P61073 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CXCR4P61073 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
CXCR4P61073 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CXCR4P61073 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC14.47□□□□□ -0.09
CXCR4P61073 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CXCR4P61073 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC14.47□□□□□ -0.09
CXCR4P61073 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CXCR4P61073 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CXCR4P61073 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CXCR4P61073 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CXCR4P61073 INIP-202ENST00000374236 874 ntTSL 2 BASIC14.47□□□□□ -0.09
CXCR4P61073 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
CXCR4P61073 RNU1-129P-201ENST00000384064 167 ntBASIC14.47□□□□□ -0.09
CXCR4P61073 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CXCR4P61073 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC14.47□□□□□ -0.09
CXCR4P61073 RNPS1P1-201ENST00000507437 918 ntBASIC14.47□□□□□ -0.09
CXCR4P61073 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CXCR4P61073 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC14.47□□□□□ -0.09
CXCR4P61073 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC14.47□□□□□ -0.09
CXCR4P61073 U1.21-201ENST00000580816 167 ntBASIC14.47□□□□□ -0.09
CXCR4P61073 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC14.47□□□□□ -0.09
CXCR4P61073 AC005593.1-201ENST00000624894 515 ntBASIC14.47□□□□□ -0.09
CXCR4P61073 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC14.47□□□□□ -0.09
CXCR4P61073 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CXCR4P61073 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
CXCR4P61073 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC14.47□□□□□ -0.09
CXCR4P61073 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
CXCR4P61073 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC14.47□□□□□ -0.09
CXCR4P61073 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CXCR4P61073 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CXCR4P61073 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CXCR4P61073 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
CXCR4P61073 CICP14-201ENST00000629111 2732 ntBASIC14.47□□□□□ -0.09
CXCR4P61073 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CXCR4P61073 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
CXCR4P61073 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC14.47□□□□□ -0.09
CXCR4P61073 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CXCR4P61073 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CXCR4P61073 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CXCR4P61073 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC14.46□□□□□ -0.09
CXCR4P61073 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CXCR4P61073 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CXCR4P61073 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC14.46□□□□□ -0.09
CXCR4P61073 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
CXCR4P61073 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CXCR4P61073 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
CXCR4P61073 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CXCR4P61073 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
CXCR4P61073 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CXCR4P61073 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC14.46□□□□□ -0.09
CXCR4P61073 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC14.46□□□□□ -0.09
CXCR4P61073 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
CXCR4P61073 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC14.46□□□□□ -0.09
CXCR4P61073 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CXCR4P61073 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CXCR4P61073 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CXCR4P61073 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CXCR4P61073 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CXCR4P61073 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CXCR4P61073 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC14.46□□□□□ -0.09
CXCR4P61073 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CXCR4P61073 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.09
CXCR4P61073 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC14.46□□□□□ -0.09
CXCR4P61073 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC14.46□□□□□ -0.09
CXCR4P61073 AC108073.2-201ENST00000464002 357 ntBASIC14.46□□□□□ -0.09
CXCR4P61073 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC14.46□□□□□ -0.09
CXCR4P61073 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC14.46□□□□□ -0.09
CXCR4P61073 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC14.46□□□□□ -0.09
CXCR4P61073 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC14.46□□□□□ -0.09
CXCR4P61073 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC14.46□□□□□ -0.09
CXCR4P61073 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CXCR4P61073 RPS29-206ENST00000557111 488 ntTSL 2 BASIC14.46□□□□□ -0.09
CXCR4P61073 AC105339.3-201ENST00000560043 636 ntBASIC14.46□□□□□ -0.09
CXCR4P61073 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC14.46□□□□□ -0.09
CXCR4P61073 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CXCR4P61073 OR7E47P-204ENST00000575924 449 ntBASIC14.46□□□□□ -0.09
CXCR4P61073 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
CXCR4P61073 AL031055.1-201ENST00000606362 631 ntBASIC14.46□□□□□ -0.09
CXCR4P61073 IFNL4P1-201ENST00000607083 540 ntBASIC14.46□□□□□ -0.09
CXCR4P61073 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CXCR4P61073 ACTL9-202ENST00000612068 1252 ntBASIC14.46□□□□□ -0.09
CXCR4P61073 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
CXCR4P61073 AC004790.2-201ENST00000623588 572 ntBASIC14.46□□□□□ -0.09
CXCR4P61073 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CXCR4P61073 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CXCR4P61073 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
CXCR4P61073 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CXCR4P61073 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC14.46□□□□□ -0.09
CXCR4P61073 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.1
CXCR4P61073 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
CXCR4P61073 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.1
CXCR4P61073 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC14.46□□□□□ -0.1
CXCR4P61073 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 56.2 ms