Protein–RNA interactions for Protein: P55036

PSMD4, 26S proteasome non-ATPase regulatory subunit 4, humanhuman

Known RBP Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD4P55036 LSM12-202ENST00000585388 942 ntTSL 3 BASIC14.8□□□□□ -0.04
PSMD4P55036 RN7SL828P-201ENST00000607615 303 ntBASIC14.8□□□□□ -0.04
PSMD4P55036 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC14.8□□□□□ -0.04
PSMD4P55036 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PSMD4P55036 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PSMD4P55036 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
PSMD4P55036 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PSMD4P55036 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC14.8□□□□□ -0.04
PSMD4P55036 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
PSMD4P55036 KRT8P37-201ENST00000451609 1420 ntBASIC14.8□□□□□ -0.04
PSMD4P55036 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
PSMD4P55036 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC14.8□□□□□ -0.04
PSMD4P55036 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
PSMD4P55036 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PSMD4P55036 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC14.8□□□□□ -0.04
PSMD4P55036 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PSMD4P55036 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC14.8□□□□□ -0.04
PSMD4P55036 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
PSMD4P55036 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC14.8□□□□□ -0.04
PSMD4P55036 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PSMD4P55036 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PSMD4P55036 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC14.8□□□□□ -0.04
PSMD4P55036 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC14.8□□□□□ -0.04
PSMD4P55036 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
PSMD4P55036 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
PSMD4P55036 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PSMD4P55036 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC14.79□□□□□ -0.04
PSMD4P55036 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
PSMD4P55036 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PSMD4P55036 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC14.79□□□□□ -0.04
PSMD4P55036 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PSMD4P55036 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PSMD4P55036 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PSMD4P55036 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PSMD4P55036 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PSMD4P55036 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
PSMD4P55036 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PSMD4P55036 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PSMD4P55036 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PSMD4P55036 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PSMD4P55036 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PSMD4P55036 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PSMD4P55036 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
PSMD4P55036 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
PSMD4P55036 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
PSMD4P55036 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PSMD4P55036 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PSMD4P55036 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
PSMD4P55036 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
PSMD4P55036 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
PSMD4P55036 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
PSMD4P55036 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
PSMD4P55036 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PSMD4P55036 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
PSMD4P55036 RBM39-205ENST00000397370 612 ntTSL 2 BASIC14.79□□□□□ -0.04
PSMD4P55036 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
PSMD4P55036 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC14.79□□□□□ -0.04
PSMD4P55036 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC14.79□□□□□ -0.04
PSMD4P55036 AL136982.4-201ENST00000437689 1740 ntBASIC14.79□□□□□ -0.04
PSMD4P55036 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC14.79□□□□□ -0.04
PSMD4P55036 MTND6P24-201ENST00000440466 518 ntBASIC14.79□□□□□ -0.04
PSMD4P55036 ELP6-209ENST00000446787 894 ntTSL 3 BASIC14.79□□□□□ -0.04
PSMD4P55036 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC14.79□□□□□ -0.04
PSMD4P55036 FAM86GP-201ENST00000448322 971 ntBASIC14.79□□□□□ -0.04
PSMD4P55036 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC14.79□□□□□ -0.04
PSMD4P55036 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC14.79□□□□□ -0.04
PSMD4P55036 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC14.79□□□□□ -0.04
PSMD4P55036 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC14.79□□□□□ -0.04
PSMD4P55036 VPS29-207ENST00000549970 818 ntTSL 3 BASIC14.79□□□□□ -0.04
PSMD4P55036 BNIP3P1-202ENST00000550043 1585 ntBASIC14.79□□□□□ -0.04
PSMD4P55036 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
PSMD4P55036 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
PSMD4P55036 AC015911.4-201ENST00000588022 1070 ntBASIC14.79□□□□□ -0.04
PSMD4P55036 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
PSMD4P55036 AL136379.1-201ENST00000623471 2642 ntBASIC14.79□□□□□ -0.04
PSMD4P55036 RPP14-202ENST00000445193 7985 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PSMD4P55036 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
PSMD4P55036 SLC43A2-201ENST00000301335 8136 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PSMD4P55036 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
PSMD4P55036 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PSMD4P55036 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PSMD4P55036 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
PSMD4P55036 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
PSMD4P55036 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
PSMD4P55036 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC14.78□□□□□ -0.04
PSMD4P55036 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
PSMD4P55036 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PSMD4P55036 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
PSMD4P55036 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC14.78□□□□□ -0.04
PSMD4P55036 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC14.78□□□□□ -0.04
PSMD4P55036 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
PSMD4P55036 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PSMD4P55036 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC14.78□□□□□ -0.04
PSMD4P55036 LOX-206ENST00000639739 1626 ntTSL 5 BASIC14.78□□□□□ -0.04
PSMD4P55036 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
PSMD4P55036 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC14.78□□□□□ -0.04
PSMD4P55036 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC14.78□□□□□ -0.04
PSMD4P55036 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PSMD4P55036 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PSMD4P55036 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC14.78□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms