Protein–RNA interactions for Protein: P53708

ITGA8, Integrin alpha-8, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA8P53708 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ITGA8P53708 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
ITGA8P53708 SNX18-202ENST00000343017 3140 ntBASIC16.29■□□□□ 0.2
ITGA8P53708 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ITGA8P53708 GPI-205ENST00000586425 1799 ntTSL 5 BASIC16.29■□□□□ 0.2
ITGA8P53708 AC148477.4-201ENST00000613430 1793 ntBASIC16.29■□□□□ 0.2
ITGA8P53708 REM2-202ENST00000536884 1331 ntTSL 2 BASIC16.29■□□□□ 0.2
ITGA8P53708 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC16.29■□□□□ 0.2
ITGA8P53708 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
ITGA8P53708 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
ITGA8P53708 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
ITGA8P53708 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ITGA8P53708 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ITGA8P53708 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ITGA8P53708 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ITGA8P53708 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC16.29■□□□□ 0.2
ITGA8P53708 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC16.29■□□□□ 0.2
ITGA8P53708 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC16.29■□□□□ 0.2
ITGA8P53708 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC16.29■□□□□ 0.2
ITGA8P53708 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
ITGA8P53708 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC16.29■□□□□ 0.2
ITGA8P53708 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC16.29■□□□□ 0.2
ITGA8P53708 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
ITGA8P53708 AP002472.1-201ENST00000577490 586 ntBASIC16.29■□□□□ 0.2
ITGA8P53708 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC16.29■□□□□ 0.2
ITGA8P53708 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC16.29■□□□□ 0.2
ITGA8P53708 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
ITGA8P53708 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ITGA8P53708 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ITGA8P53708 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
ITGA8P53708 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ITGA8P53708 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
ITGA8P53708 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC16.29■□□□□ 0.2
ITGA8P53708 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC16.29■□□□□ 0.2
ITGA8P53708 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
ITGA8P53708 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
ITGA8P53708 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC16.29■□□□□ 0.2
ITGA8P53708 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ITGA8P53708 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ITGA8P53708 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC16.29■□□□□ 0.2
ITGA8P53708 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
ITGA8P53708 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC16.29■□□□□ 0.2
ITGA8P53708 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC16.29■□□□□ 0.2
ITGA8P53708 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC16.28■□□□□ 0.2
ITGA8P53708 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
ITGA8P53708 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
ITGA8P53708 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
ITGA8P53708 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
ITGA8P53708 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ITGA8P53708 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ITGA8P53708 AL136982.4-201ENST00000437689 1740 ntBASIC16.28■□□□□ 0.2
ITGA8P53708 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
ITGA8P53708 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
ITGA8P53708 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ITGA8P53708 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
ITGA8P53708 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
ITGA8P53708 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ITGA8P53708 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
ITGA8P53708 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC16.28■□□□□ 0.2
ITGA8P53708 AC023024.2-201ENST00000623561 1993 ntBASIC16.28■□□□□ 0.2
ITGA8P53708 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ITGA8P53708 AC013726.1-201ENST00000563747 2285 ntBASIC16.28■□□□□ 0.2
ITGA8P53708 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC16.28■□□□□ 0.2
ITGA8P53708 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC16.28■□□□□ 0.2
ITGA8P53708 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ITGA8P53708 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ITGA8P53708 AC004987.2-201ENST00000395959 1148 ntBASIC16.28■□□□□ 0.2
ITGA8P53708 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
ITGA8P53708 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC16.28■□□□□ 0.2
ITGA8P53708 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC16.28■□□□□ 0.2
ITGA8P53708 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC16.28■□□□□ 0.2
ITGA8P53708 SMN2-210ENST00000511812 867 ntTSL 2 BASIC16.28■□□□□ 0.2
ITGA8P53708 AC105233.2-201ENST00000523697 349 ntBASIC16.28■□□□□ 0.2
ITGA8P53708 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC16.28■□□□□ 0.2
ITGA8P53708 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC16.28■□□□□ 0.2
ITGA8P53708 AF228730.5-201ENST00000530288 346 ntBASIC16.28■□□□□ 0.2
ITGA8P53708 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC16.28■□□□□ 0.2
ITGA8P53708 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC16.28■□□□□ 0.2
ITGA8P53708 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
ITGA8P53708 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC16.28■□□□□ 0.2
ITGA8P53708 AC099522.2-201ENST00000607001 744 ntBASIC16.28■□□□□ 0.2
ITGA8P53708 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC16.28■□□□□ 0.2
ITGA8P53708 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC16.28■□□□□ 0.2
ITGA8P53708 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
ITGA8P53708 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
ITGA8P53708 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
ITGA8P53708 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC16.28■□□□□ 0.2
ITGA8P53708 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
ITGA8P53708 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC16.28■□□□□ 0.2
ITGA8P53708 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC16.28■□□□□ 0.2
ITGA8P53708 AC007292.2-201ENST00000593524 1812 ntBASIC16.28■□□□□ 0.2
ITGA8P53708 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
ITGA8P53708 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
ITGA8P53708 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC16.28■□□□□ 0.2
ITGA8P53708 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ITGA8P53708 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ITGA8P53708 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
ITGA8P53708 COCH-203ENST00000460581 2688 ntTSL 2 BASIC16.28■□□□□ 0.2
ITGA8P53708 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC16.28■□□□□ 0.2
ITGA8P53708 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC16.28■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 56.3 ms