Protein–RNA interactions for Protein: P52738

ZNF140, Zinc finger protein 140, humanhuman

Predicted RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF140P52738 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
ZNF140P52738 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC15.72■□□□□ 0.11
ZNF140P52738 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
ZNF140P52738 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
ZNF140P52738 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
ZNF140P52738 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.11
ZNF140P52738 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
ZNF140P52738 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
ZNF140P52738 F11R-206ENST00000621309 4770 ntTSL 5 BASIC15.71■□□□□ 0.11
ZNF140P52738 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC15.71■□□□□ 0.11
ZNF140P52738 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
ZNF140P52738 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
ZNF140P52738 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC15.71■□□□□ 0.11
ZNF140P52738 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC15.71■□□□□ 0.11
ZNF140P52738 DEK-201ENST00000244776 1441 ntTSL 2 BASIC15.71■□□□□ 0.11
ZNF140P52738 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC15.71■□□□□ 0.11
ZNF140P52738 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
ZNF140P52738 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
ZNF140P52738 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
ZNF140P52738 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
ZNF140P52738 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC15.71■□□□□ 0.11
ZNF140P52738 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
ZNF140P52738 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC15.71■□□□□ 0.11
ZNF140P52738 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC15.71■□□□□ 0.11
ZNF140P52738 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC15.71■□□□□ 0.11
ZNF140P52738 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
ZNF140P52738 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC15.71■□□□□ 0.11
ZNF140P52738 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.11
ZNF140P52738 AC015922.1-201ENST00000421102 1152 ntBASIC15.71■□□□□ 0.11
ZNF140P52738 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC15.71■□□□□ 0.11
ZNF140P52738 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
ZNF140P52738 AC114501.2-201ENST00000439631 535 ntBASIC15.71■□□□□ 0.11
ZNF140P52738 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC15.71■□□□□ 0.11
ZNF140P52738 CYMP-203ENST00000474680 1263 ntBASIC15.71■□□□□ 0.11
ZNF140P52738 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC15.71■□□□□ 0.11
ZNF140P52738 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC15.71■□□□□ 0.11
ZNF140P52738 TEX48-202ENST00000612244 662 ntTSL 3 BASIC15.71■□□□□ 0.11
ZNF140P52738 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC15.71■□□□□ 0.11
ZNF140P52738 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC15.71■□□□□ 0.11
ZNF140P52738 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
ZNF140P52738 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.11
ZNF140P52738 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC15.71■□□□□ 0.11
ZNF140P52738 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.11
ZNF140P52738 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
ZNF140P52738 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
ZNF140P52738 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
ZNF140P52738 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
ZNF140P52738 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC15.71■□□□□ 0.1
ZNF140P52738 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC15.71■□□□□ 0.1
ZNF140P52738 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
ZNF140P52738 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
ZNF140P52738 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
ZNF140P52738 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
ZNF140P52738 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
ZNF140P52738 STK24-203ENST00000397517 4578 ntTSL 2 BASIC15.7■□□□□ 0.1
ZNF140P52738 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
ZNF140P52738 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC15.7■□□□□ 0.1
ZNF140P52738 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
ZNF140P52738 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
ZNF140P52738 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC15.7■□□□□ 0.1
ZNF140P52738 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
ZNF140P52738 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
ZNF140P52738 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC15.7■□□□□ 0.1
ZNF140P52738 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
ZNF140P52738 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
ZNF140P52738 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
ZNF140P52738 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
ZNF140P52738 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
ZNF140P52738 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC15.7■□□□□ 0.1
ZNF140P52738 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC15.7■□□□□ 0.1
ZNF140P52738 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC15.7■□□□□ 0.1
ZNF140P52738 RAB35-202ENST00000534951 939 ntTSL 2 BASIC15.7■□□□□ 0.1
ZNF140P52738 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC15.7■□□□□ 0.1
ZNF140P52738 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC15.7■□□□□ 0.1
ZNF140P52738 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
ZNF140P52738 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
ZNF140P52738 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC15.7■□□□□ 0.1
ZNF140P52738 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
ZNF140P52738 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC15.7■□□□□ 0.1
ZNF140P52738 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
ZNF140P52738 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
ZNF140P52738 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
ZNF140P52738 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
ZNF140P52738 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
ZNF140P52738 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
ZNF140P52738 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC15.7■□□□□ 0.1
ZNF140P52738 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
ZNF140P52738 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
ZNF140P52738 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
ZNF140P52738 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
ZNF140P52738 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
ZNF140P52738 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
ZNF140P52738 C18orf15-201ENST00000623680 2534 ntBASIC15.69■□□□□ 0.1
ZNF140P52738 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
ZNF140P52738 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC15.69■□□□□ 0.1
ZNF140P52738 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
ZNF140P52738 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
ZNF140P52738 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
ZNF140P52738 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
ZNF140P52738 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 61.6 ms