Protein–RNA interactions for Protein: P51148

RAB5C, Ras-related protein Rab-5C, humanhuman

Predictions only

Length 216 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5CP51148 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
RAB5CP51148 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
RAB5CP51148 HNRNPH1-204ENST00000442819 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
RAB5CP51148 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
RAB5CP51148 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
RAB5CP51148 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
RAB5CP51148 ARMC10P1-201ENST00000313754 855 ntBASIC12.8□□□□□ -0.36
RAB5CP51148 STARD13-205ENST00000439831 945 ntTSL 2 BASIC12.8□□□□□ -0.36
RAB5CP51148 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC12.8□□□□□ -0.36
RAB5CP51148 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC12.8□□□□□ -0.36
RAB5CP51148 EHF-205ENST00000527935 557 ntTSL 2 BASIC12.8□□□□□ -0.36
RAB5CP51148 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC12.8□□□□□ -0.36
RAB5CP51148 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC12.8□□□□□ -0.36
RAB5CP51148 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC12.8□□□□□ -0.36
RAB5CP51148 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC12.8□□□□□ -0.36
RAB5CP51148 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC12.8□□□□□ -0.36
RAB5CP51148 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC12.8□□□□□ -0.36
RAB5CP51148 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC12.8□□□□□ -0.36
RAB5CP51148 GUF1-201ENST00000281543 4449 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
RAB5CP51148 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
RAB5CP51148 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
RAB5CP51148 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
RAB5CP51148 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
RAB5CP51148 VPS26B-201ENST00000281187 3691 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
RAB5CP51148 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
RAB5CP51148 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC12.8□□□□□ -0.36
RAB5CP51148 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
RAB5CP51148 GAB2-202ENST00000361507 6092 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
RAB5CP51148 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
RAB5CP51148 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC12.8□□□□□ -0.36
RAB5CP51148 BCAN-201ENST00000329117 3466 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
RAB5CP51148 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
RAB5CP51148 ACTR10-201ENST00000254286 2419 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
RAB5CP51148 ADCY3-202ENST00000405392 4397 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
RAB5CP51148 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
RAB5CP51148 PRKCB-201ENST00000303531 7969 ntAPPRIS P4 TSL 1 (best) BASIC12.8□□□□□ -0.36
RAB5CP51148 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
RAB5CP51148 TMEM104-201ENST00000335464 4745 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
RAB5CP51148 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
RAB5CP51148 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
RAB5CP51148 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
RAB5CP51148 USP22-201ENST00000261497 5220 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
RAB5CP51148 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC12.79□□□□□ -0.36
RAB5CP51148 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
RAB5CP51148 FBXO21-202ENST00000427718 4138 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
RAB5CP51148 IKZF1-205ENST00000357364 5925 ntTSL 5 BASIC12.79□□□□□ -0.36
RAB5CP51148 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
RAB5CP51148 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC12.79□□□□□ -0.36
RAB5CP51148 PTPA-205ENST00000357197 2653 ntTSL 2 BASIC12.79□□□□□ -0.36
RAB5CP51148 GRIK4-208ENST00000638419 3593 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
RAB5CP51148 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC12.79□□□□□ -0.36
RAB5CP51148 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
RAB5CP51148 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC12.79□□□□□ -0.36
RAB5CP51148 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
RAB5CP51148 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
RAB5CP51148 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
RAB5CP51148 MYADM-203ENST00000391769 3186 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
RAB5CP51148 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
RAB5CP51148 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC12.79□□□□□ -0.36
RAB5CP51148 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC12.79□□□□□ -0.36
RAB5CP51148 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
RAB5CP51148 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
RAB5CP51148 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC12.79□□□□□ -0.36
RAB5CP51148 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC12.79□□□□□ -0.36
RAB5CP51148 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
RAB5CP51148 ISY1-RAB43-201ENST00000418265 4868 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
RAB5CP51148 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
RAB5CP51148 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
RAB5CP51148 SSTR1-201ENST00000267377 4295 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
RAB5CP51148 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
RAB5CP51148 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC12.79□□□□□ -0.36
RAB5CP51148 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC12.79□□□□□ -0.36
RAB5CP51148 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
RAB5CP51148 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
RAB5CP51148 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC12.79□□□□□ -0.36
RAB5CP51148 SLC35E2B-205ENST00000617444 6283 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
RAB5CP51148 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
RAB5CP51148 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC12.79□□□□□ -0.36
RAB5CP51148 PRF1-202ENST00000441259 2533 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
RAB5CP51148 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC12.79□□□□□ -0.36
RAB5CP51148 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
RAB5CP51148 PCDHGA3-201ENST00000253812 4771 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
RAB5CP51148 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
RAB5CP51148 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
RAB5CP51148 TAS1R3-201ENST00000339381 3433 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
RAB5CP51148 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC12.78□□□□□ -0.36
RAB5CP51148 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
RAB5CP51148 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC12.78□□□□□ -0.36
RAB5CP51148 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC12.78□□□□□ -0.36
RAB5CP51148 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
RAB5CP51148 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
RAB5CP51148 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
RAB5CP51148 ZNF202-206ENST00000529691 3384 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
RAB5CP51148 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
RAB5CP51148 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
RAB5CP51148 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
RAB5CP51148 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
RAB5CP51148 DPM2-202ENST00000373110 738 ntTSL 2 BASIC12.78□□□□□ -0.36
RAB5CP51148 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
RAB5CP51148 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms