Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC15.06■□□□□ 0
PTPN6P29350 KRT8P44-201ENST00000441609 1350 ntBASIC15.06■□□□□ 0
PTPN6P29350 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC15.06■□□□□ 0
PTPN6P29350 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC15.06■□□□□ 0
PTPN6P29350 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
PTPN6P29350 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC15.06■□□□□ 0
PTPN6P29350 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
PTPN6P29350 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
PTPN6P29350 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
PTPN6P29350 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
PTPN6P29350 AC127383.1-201ENST00000444697 1800 ntBASIC15.06■□□□□ 0
PTPN6P29350 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
PTPN6P29350 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
PTPN6P29350 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
PTPN6P29350 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
PTPN6P29350 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
PTPN6P29350 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ 0
PTPN6P29350 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC15.05■□□□□ 0
PTPN6P29350 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
PTPN6P29350 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
PTPN6P29350 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC15.05■□□□□ 0
PTPN6P29350 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
PTPN6P29350 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
PTPN6P29350 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC15.05■□□□□ -0
PTPN6P29350 AC004987.2-201ENST00000395959 1148 ntBASIC15.05■□□□□ -0
PTPN6P29350 CBR1-202ENST00000399191 838 ntTSL 3 BASIC15.05■□□□□ -0
PTPN6P29350 GGCT-205ENST00000409436 954 ntTSL 3 BASIC15.05■□□□□ -0
PTPN6P29350 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC15.05■□□□□ -0
PTPN6P29350 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC15.05■□□□□ -0
PTPN6P29350 METTL21AP1-201ENST00000438852 635 ntBASIC15.05■□□□□ -0
PTPN6P29350 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
PTPN6P29350 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC15.05■□□□□ -0
PTPN6P29350 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC15.05■□□□□ -0
PTPN6P29350 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC15.05■□□□□ -0
PTPN6P29350 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC15.05■□□□□ -0
PTPN6P29350 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC15.05■□□□□ -0
PTPN6P29350 TSFM-210ENST00000550559 897 ntTSL 5 BASIC15.05■□□□□ -0
PTPN6P29350 AC027307.2-201ENST00000591252 911 ntBASIC15.05■□□□□ -0
PTPN6P29350 NKG7-205ENST00000600427 520 ntTSL 3 BASIC15.05■□□□□ -0
PTPN6P29350 AC009093.7-201ENST00000623853 1223 ntBASIC15.05■□□□□ -0
PTPN6P29350 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC15.05■□□□□ -0
PTPN6P29350 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC15.05■□□□□ -0
PTPN6P29350 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC15.05■□□□□ -0
PTPN6P29350 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC15.05■□□□□ -0
PTPN6P29350 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
PTPN6P29350 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC15.05■□□□□ -0
PTPN6P29350 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
PTPN6P29350 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
PTPN6P29350 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC15.05■□□□□ -0
PTPN6P29350 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
PTPN6P29350 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC15.05■□□□□ -0
PTPN6P29350 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
PTPN6P29350 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC15.05■□□□□ -0
PTPN6P29350 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
PTPN6P29350 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC15.05■□□□□ -0
PTPN6P29350 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
PTPN6P29350 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
PTPN6P29350 LINC02228-204ENST00000642115 2962 ntBASIC15.05■□□□□ -0
PTPN6P29350 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
PTPN6P29350 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
PTPN6P29350 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC15.05■□□□□ -0
PTPN6P29350 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
PTPN6P29350 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
PTPN6P29350 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
PTPN6P29350 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
PTPN6P29350 PARN-202ENST00000420015 2360 ntTSL 2 BASIC15.04■□□□□ -0
PTPN6P29350 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
PTPN6P29350 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC15.04■□□□□ -0
PTPN6P29350 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
PTPN6P29350 AC063926.3-201ENST00000624734 5658 ntBASIC15.04■□□□□ -0
PTPN6P29350 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC15.04■□□□□ -0
PTPN6P29350 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC15.04■□□□□ -0
PTPN6P29350 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC15.04■□□□□ -0
PTPN6P29350 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
PTPN6P29350 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC15.04■□□□□ -0
PTPN6P29350 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
PTPN6P29350 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC15.04■□□□□ -0
PTPN6P29350 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
PTPN6P29350 TSEN15P1-201ENST00000423257 515 ntBASIC15.04■□□□□ -0
PTPN6P29350 PMS2P2-201ENST00000425039 1128 ntBASIC15.04■□□□□ -0
PTPN6P29350 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC15.04■□□□□ -0
PTPN6P29350 EEF1DP4-201ENST00000446006 880 ntBASIC15.04■□□□□ -0
PTPN6P29350 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC15.04■□□□□ -0
PTPN6P29350 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC15.04■□□□□ -0
PTPN6P29350 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC15.04■□□□□ -0
PTPN6P29350 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC15.04■□□□□ -0
PTPN6P29350 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC15.04■□□□□ -0
PTPN6P29350 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC15.04■□□□□ -0
PTPN6P29350 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC15.04■□□□□ -0
PTPN6P29350 AC084121.4-201ENST00000641598 221 ntBASIC15.04■□□□□ -0
PTPN6P29350 AF228730.8-201ENST00000642140 221 ntBASIC15.04■□□□□ -0
PTPN6P29350 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
PTPN6P29350 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC15.04■□□□□ -0
PTPN6P29350 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC15.04■□□□□ -0
PTPN6P29350 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC15.04■□□□□ -0
PTPN6P29350 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC15.04■□□□□ -0
PTPN6P29350 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
PTPN6P29350 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC15.04■□□□□ -0
PTPN6P29350 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
PTPN6P29350 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC15.04■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms