Protein–RNA interactions for Protein: P28288

ABCD3, ATP-binding cassette sub-family D member 3, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3P28288 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
ABCD3P28288 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC14.61□□□□□ -0.07
ABCD3P28288 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC14.61□□□□□ -0.07
ABCD3P28288 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC14.61□□□□□ -0.07
ABCD3P28288 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
ABCD3P28288 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
ABCD3P28288 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC14.61□□□□□ -0.07
ABCD3P28288 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
ABCD3P28288 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
ABCD3P28288 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC14.61□□□□□ -0.07
ABCD3P28288 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
ABCD3P28288 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
ABCD3P28288 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
ABCD3P28288 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
ABCD3P28288 BANP-201ENST00000286122 2368 ntTSL 5 BASIC14.6□□□□□ -0.07
ABCD3P28288 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC14.6□□□□□ -0.07
ABCD3P28288 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
ABCD3P28288 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC14.6□□□□□ -0.07
ABCD3P28288 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC14.6□□□□□ -0.07
ABCD3P28288 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC14.6□□□□□ -0.07
ABCD3P28288 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
ABCD3P28288 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
ABCD3P28288 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
ABCD3P28288 RAC2-204ENST00000406508 893 ntTSL 5 BASIC14.6□□□□□ -0.07
ABCD3P28288 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC14.6□□□□□ -0.07
ABCD3P28288 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC14.6□□□□□ -0.07
ABCD3P28288 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC14.6□□□□□ -0.07
ABCD3P28288 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC14.6□□□□□ -0.07
ABCD3P28288 AC114501.2-201ENST00000439631 535 ntBASIC14.6□□□□□ -0.07
ABCD3P28288 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC14.6□□□□□ -0.07
ABCD3P28288 TSPY16P-201ENST00000449843 468 ntBASIC14.6□□□□□ -0.07
ABCD3P28288 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC14.6□□□□□ -0.07
ABCD3P28288 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC14.6□□□□□ -0.07
ABCD3P28288 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
ABCD3P28288 5S_rRNA.22-201ENST00000614916 106 ntBASIC14.6□□□□□ -0.07
ABCD3P28288 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC14.6□□□□□ -0.07
ABCD3P28288 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC14.6□□□□□ -0.07
ABCD3P28288 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
ABCD3P28288 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
ABCD3P28288 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
ABCD3P28288 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC14.6□□□□□ -0.07
ABCD3P28288 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
ABCD3P28288 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC14.6□□□□□ -0.07
ABCD3P28288 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
ABCD3P28288 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
ABCD3P28288 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
ABCD3P28288 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
ABCD3P28288 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
ABCD3P28288 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC14.6□□□□□ -0.07
ABCD3P28288 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
ABCD3P28288 PKD1P5-201ENST00000532415 10291 ntBASIC14.59□□□□□ -0.07
ABCD3P28288 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
ABCD3P28288 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
ABCD3P28288 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
ABCD3P28288 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC14.59□□□□□ -0.07
ABCD3P28288 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
ABCD3P28288 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
ABCD3P28288 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
ABCD3P28288 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC14.59□□□□□ -0.07
ABCD3P28288 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
ABCD3P28288 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
ABCD3P28288 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC14.59□□□□□ -0.07
ABCD3P28288 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
ABCD3P28288 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
ABCD3P28288 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC14.59□□□□□ -0.07
ABCD3P28288 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC14.59□□□□□ -0.07
ABCD3P28288 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
ABCD3P28288 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC14.59□□□□□ -0.07
ABCD3P28288 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC14.59□□□□□ -0.07
ABCD3P28288 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
ABCD3P28288 FAM8A3P-201ENST00000427218 844 ntBASIC14.59□□□□□ -0.07
ABCD3P28288 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC14.59□□□□□ -0.07
ABCD3P28288 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC14.59□□□□□ -0.07
ABCD3P28288 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC14.59□□□□□ -0.07
ABCD3P28288 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
ABCD3P28288 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC14.59□□□□□ -0.07
ABCD3P28288 REEP4-207ENST00000523293 913 ntTSL 3 BASIC14.59□□□□□ -0.07
ABCD3P28288 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC14.59□□□□□ -0.07
ABCD3P28288 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC14.59□□□□□ -0.07
ABCD3P28288 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
ABCD3P28288 AC004461.2-201ENST00000629517 803 ntBASIC14.59□□□□□ -0.07
ABCD3P28288 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
ABCD3P28288 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
ABCD3P28288 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC14.59□□□□□ -0.07
ABCD3P28288 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
ABCD3P28288 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
ABCD3P28288 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
ABCD3P28288 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
ABCD3P28288 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
ABCD3P28288 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC14.59□□□□□ -0.07
ABCD3P28288 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC14.59□□□□□ -0.07
ABCD3P28288 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
ABCD3P28288 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC14.59□□□□□ -0.07
ABCD3P28288 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
ABCD3P28288 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
ABCD3P28288 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
ABCD3P28288 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
ABCD3P28288 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
ABCD3P28288 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
ABCD3P28288 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms