Protein–RNA interactions for Protein: P18887

XRCC1, DNA repair protein XRCC1, humanhuman

Predicted RBP Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1P18887 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC15.85■□□□□ 0.13
XRCC1P18887 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC15.85■□□□□ 0.13
XRCC1P18887 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
XRCC1P18887 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
XRCC1P18887 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
XRCC1P18887 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
XRCC1P18887 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
XRCC1P18887 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC15.84■□□□□ 0.13
XRCC1P18887 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
XRCC1P18887 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC15.84■□□□□ 0.13
XRCC1P18887 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
XRCC1P18887 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC15.84■□□□□ 0.13
XRCC1P18887 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
XRCC1P18887 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
XRCC1P18887 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
XRCC1P18887 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
XRCC1P18887 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
XRCC1P18887 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
XRCC1P18887 AC241585.1-201ENST00000433527 519 ntBASIC15.84■□□□□ 0.13
XRCC1P18887 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC15.84■□□□□ 0.13
XRCC1P18887 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC15.84■□□□□ 0.13
XRCC1P18887 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC15.84■□□□□ 0.13
XRCC1P18887 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC15.84■□□□□ 0.13
XRCC1P18887 LY6E-204ENST00000519546 971 ntTSL 2 BASIC15.84■□□□□ 0.13
XRCC1P18887 BANF1P1-201ENST00000553684 263 ntBASIC15.84■□□□□ 0.13
XRCC1P18887 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC15.84■□□□□ 0.13
XRCC1P18887 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
XRCC1P18887 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
XRCC1P18887 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC15.84■□□□□ 0.13
XRCC1P18887 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC15.84■□□□□ 0.13
XRCC1P18887 AL390754.1-201ENST00000619088 582 ntBASIC15.84■□□□□ 0.13
XRCC1P18887 AL590560.3-201ENST00000623350 461 ntBASIC15.84■□□□□ 0.13
XRCC1P18887 AC069224.1-201ENST00000566372 1715 ntBASIC15.84■□□□□ 0.13
XRCC1P18887 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
XRCC1P18887 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC15.84■□□□□ 0.13
XRCC1P18887 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
XRCC1P18887 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
XRCC1P18887 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
XRCC1P18887 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
XRCC1P18887 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
XRCC1P18887 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
XRCC1P18887 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
XRCC1P18887 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
XRCC1P18887 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC15.84■□□□□ 0.13
XRCC1P18887 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC15.84■□□□□ 0.13
XRCC1P18887 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
XRCC1P18887 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC15.84■□□□□ 0.13
XRCC1P18887 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
XRCC1P18887 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
XRCC1P18887 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC15.84■□□□□ 0.13
XRCC1P18887 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC15.83■□□□□ 0.13
XRCC1P18887 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC15.83■□□□□ 0.13
XRCC1P18887 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.13
XRCC1P18887 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
XRCC1P18887 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
XRCC1P18887 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
XRCC1P18887 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.13
XRCC1P18887 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.13
XRCC1P18887 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
XRCC1P18887 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC15.83■□□□□ 0.13
XRCC1P18887 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
XRCC1P18887 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
XRCC1P18887 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
XRCC1P18887 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
XRCC1P18887 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
XRCC1P18887 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
XRCC1P18887 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
XRCC1P18887 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
XRCC1P18887 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.12
XRCC1P18887 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC15.83■□□□□ 0.12
XRCC1P18887 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
XRCC1P18887 WDR53-203ENST00000429115 683 ntTSL 2 BASIC15.83■□□□□ 0.12
XRCC1P18887 AL512638.1-201ENST00000457493 794 ntBASIC15.83■□□□□ 0.12
XRCC1P18887 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
XRCC1P18887 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
XRCC1P18887 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC15.83■□□□□ 0.12
XRCC1P18887 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
XRCC1P18887 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
XRCC1P18887 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC15.83■□□□□ 0.12
XRCC1P18887 NAA38-207ENST00000576861 556 ntTSL 3 BASIC15.83■□□□□ 0.12
XRCC1P18887 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC15.83■□□□□ 0.12
XRCC1P18887 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
XRCC1P18887 AL133215.2-201ENST00000609242 977 ntBASIC15.83■□□□□ 0.12
XRCC1P18887 AL138828.2-201ENST00000615812 383 ntBASIC15.83■□□□□ 0.12
XRCC1P18887 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
XRCC1P18887 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
XRCC1P18887 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.12
XRCC1P18887 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
XRCC1P18887 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
XRCC1P18887 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
XRCC1P18887 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC15.83■□□□□ 0.12
XRCC1P18887 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
XRCC1P18887 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
XRCC1P18887 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
XRCC1P18887 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
XRCC1P18887 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
XRCC1P18887 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
XRCC1P18887 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
XRCC1P18887 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
XRCC1P18887 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC15.83■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 65.3 ms