Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
COL5A2P05997 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
COL5A2P05997 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
COL5A2P05997 GSTT2B-201ENST00000290765 1099 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
COL5A2P05997 SLC16A6P1-201ENST00000413214 1059 ntBASIC20.37■□□□□ 0.85
COL5A2P05997 GHSR-202ENST00000427970 912 ntBASIC20.37■□□□□ 0.85
COL5A2P05997 AL591684.1-201ENST00000434533 234 ntTSL 5 BASIC20.37■□□□□ 0.85
COL5A2P05997 AL136982.2-201ENST00000451760 234 ntTSL 5 BASIC20.37■□□□□ 0.85
COL5A2P05997 CLDN11-207ENST00000486975 1139 ntTSL 2 BASIC20.37■□□□□ 0.85
COL5A2P05997 AC124301.1-201ENST00000524885 602 ntTSL 3 BASIC20.37■□□□□ 0.85
COL5A2P05997 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC20.37■□□□□ 0.85
COL5A2P05997 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC20.37■□□□□ 0.85
COL5A2P05997 AC023824.4-202ENST00000569557 849 ntTSL 3 BASIC20.37■□□□□ 0.85
COL5A2P05997 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
COL5A2P05997 AL023803.2-201ENST00000620080 638 ntBASIC20.37■□□□□ 0.85
COL5A2P05997 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
COL5A2P05997 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
COL5A2P05997 AC018695.7-201ENST00000624587 2492 ntBASIC20.36■□□□□ 0.85
COL5A2P05997 AC006480.2-201ENST00000609770 1337 ntBASIC20.36■□□□□ 0.85
COL5A2P05997 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
COL5A2P05997 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC20.36■□□□□ 0.85
COL5A2P05997 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC20.36■□□□□ 0.85
COL5A2P05997 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
COL5A2P05997 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC20.36■□□□□ 0.85
COL5A2P05997 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
COL5A2P05997 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
COL5A2P05997 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
COL5A2P05997 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC20.36■□□□□ 0.85
COL5A2P05997 NPPA-201ENST00000376476 728 ntTSL 3 BASIC20.36■□□□□ 0.85
COL5A2P05997 PEX13-203ENST00000414712 1014 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
COL5A2P05997 Z82214.1-201ENST00000419643 988 ntTSL 3 BASIC20.36■□□□□ 0.85
COL5A2P05997 Z97180.1-201ENST00000445173 988 ntBASIC20.36■□□□□ 0.85
COL5A2P05997 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC20.36■□□□□ 0.85
COL5A2P05997 MARK2P5-201ENST00000507649 634 ntBASIC20.36■□□□□ 0.85
COL5A2P05997 MCPH1-AS1-203ENST00000525186 869 ntTSL 3 BASIC20.36■□□□□ 0.85
COL5A2P05997 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
COL5A2P05997 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC20.36■□□□□ 0.85
COL5A2P05997 AC103988.2-201ENST00000561804 725 ntBASIC20.36■□□□□ 0.85
COL5A2P05997 PYY-202ENST00000592796 580 ntAPPRIS ALT1 TSL 1 (best) BASIC20.36■□□□□ 0.85
COL5A2P05997 CDK7-214ENST00000626796 358 ntTSL 5 BASIC20.36■□□□□ 0.85
COL5A2P05997 CDK7-215ENST00000629350 1149 ntTSL 5 BASIC20.36■□□□□ 0.85
COL5A2P05997 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
COL5A2P05997 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
COL5A2P05997 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
COL5A2P05997 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
COL5A2P05997 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC20.35■□□□□ 0.85
COL5A2P05997 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
COL5A2P05997 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC20.35■□□□□ 0.85
COL5A2P05997 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC20.35■□□□□ 0.85
COL5A2P05997 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
COL5A2P05997 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
COL5A2P05997 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
COL5A2P05997 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
COL5A2P05997 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC20.35■□□□□ 0.85
COL5A2P05997 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
COL5A2P05997 DPCD-202ENST00000370151 858 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
COL5A2P05997 C6orf136-202ENST00000376471 614 ntTSL 3 BASIC20.35■□□□□ 0.85
COL5A2P05997 AC234782.1-201ENST00000451950 919 ntBASIC20.35■□□□□ 0.85
COL5A2P05997 RNMTL1P1-201ENST00000454103 560 ntBASIC20.35■□□□□ 0.85
COL5A2P05997 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC20.35■□□□□ 0.85
COL5A2P05997 AC116345.2-201ENST00000512837 523 ntBASIC20.35■□□□□ 0.85
COL5A2P05997 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
COL5A2P05997 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
COL5A2P05997 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
COL5A2P05997 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC20.35■□□□□ 0.85
COL5A2P05997 AC138466.3-201ENST00000619983 221 ntBASIC20.35■□□□□ 0.85
COL5A2P05997 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
COL5A2P05997 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
COL5A2P05997 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
COL5A2P05997 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC20.35■□□□□ 0.85
COL5A2P05997 EML3-212ENST00000494176 2901 ntTSL 2 BASIC20.35■□□□□ 0.85
COL5A2P05997 EML3-216ENST00000529309 2909 ntTSL 2 BASIC20.35■□□□□ 0.85
COL5A2P05997 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
COL5A2P05997 CLUHP2-201ENST00000426660 1303 ntBASIC20.35■□□□□ 0.85
COL5A2P05997 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC20.35■□□□□ 0.85
COL5A2P05997 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
COL5A2P05997 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
COL5A2P05997 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC20.34■□□□□ 0.85
COL5A2P05997 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
COL5A2P05997 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
COL5A2P05997 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC20.34■□□□□ 0.85
COL5A2P05997 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
COL5A2P05997 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
COL5A2P05997 C6orf52-201ENST00000259983 619 ntAPPRIS P2 TSL 5 BASIC20.34■□□□□ 0.85
COL5A2P05997 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
COL5A2P05997 LYPLA2-202ENST00000374502 1072 ntTSL 2 BASIC20.34■□□□□ 0.85
COL5A2P05997 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC20.34■□□□□ 0.85
COL5A2P05997 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
COL5A2P05997 IQSEC3P1-201ENST00000538799 536 ntBASIC20.34■□□□□ 0.85
COL5A2P05997 AL135838.1-202ENST00000556411 441 ntTSL 2 BASIC20.34■□□□□ 0.85
COL5A2P05997 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC20.34■□□□□ 0.85
COL5A2P05997 AC004466.1-201ENST00000599515 1080 ntBASIC20.34■□□□□ 0.85
COL5A2P05997 AL603764.1-201ENST00000636452 321 ntBASIC20.34■□□□□ 0.85
COL5A2P05997 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC20.34■□□□□ 0.85
COL5A2P05997 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
COL5A2P05997 AC124067.4-201ENST00000519691 2379 ntBASIC20.34■□□□□ 0.85
COL5A2P05997 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
COL5A2P05997 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
COL5A2P05997 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC20.34■□□□□ 0.85
COL5A2P05997 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 54.1 ms