Protein–RNA interactions for Protein: P04628

WNT1, Proto-oncogene Wnt-1, humanhuman

Predictions only

Length 370 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
WNT1P04628 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
WNT1P04628 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC15.48■□□□□ 0.07
WNT1P04628 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
WNT1P04628 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC15.48■□□□□ 0.07
WNT1P04628 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
WNT1P04628 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
WNT1P04628 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
WNT1P04628 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC15.47■□□□□ 0.07
WNT1P04628 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC15.47■□□□□ 0.07
WNT1P04628 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC15.47■□□□□ 0.07
WNT1P04628 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
WNT1P04628 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
WNT1P04628 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
WNT1P04628 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
WNT1P04628 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
WNT1P04628 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
WNT1P04628 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
WNT1P04628 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
WNT1P04628 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
WNT1P04628 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
WNT1P04628 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
WNT1P04628 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
WNT1P04628 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
WNT1P04628 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
WNT1P04628 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC15.47■□□□□ 0.07
WNT1P04628 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC15.47■□□□□ 0.07
WNT1P04628 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC15.47■□□□□ 0.07
WNT1P04628 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC15.47■□□□□ 0.07
WNT1P04628 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC15.47■□□□□ 0.07
WNT1P04628 RNA5SP412-201ENST00000516234 123 ntBASIC15.47■□□□□ 0.07
WNT1P04628 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC15.47■□□□□ 0.07
WNT1P04628 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC15.47■□□□□ 0.07
WNT1P04628 CMC2-214ENST00000565925 640 ntTSL 5 BASIC15.47■□□□□ 0.07
WNT1P04628 AP001063.1-201ENST00000568332 529 ntBASIC15.47■□□□□ 0.07
WNT1P04628 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
WNT1P04628 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC15.47■□□□□ 0.07
WNT1P04628 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC15.47■□□□□ 0.07
WNT1P04628 RN7SL219P-201ENST00000582872 296 ntBASIC15.47■□□□□ 0.07
WNT1P04628 ATF5-205ENST00000600336 682 ntTSL 2 BASIC15.47■□□□□ 0.07
WNT1P04628 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
WNT1P04628 METTL26-214ENST00000614890 801 ntTSL 3 BASIC15.47■□□□□ 0.07
WNT1P04628 GPR182-203ENST00000622922 591 ntBASIC15.47■□□□□ 0.07
WNT1P04628 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
WNT1P04628 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC15.47■□□□□ 0.07
WNT1P04628 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
WNT1P04628 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
WNT1P04628 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
WNT1P04628 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
WNT1P04628 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC15.47■□□□□ 0.07
WNT1P04628 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
WNT1P04628 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
WNT1P04628 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
WNT1P04628 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
WNT1P04628 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
WNT1P04628 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
WNT1P04628 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
WNT1P04628 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC15.46■□□□□ 0.07
WNT1P04628 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
WNT1P04628 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC15.46■□□□□ 0.07
WNT1P04628 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
WNT1P04628 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
WNT1P04628 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
WNT1P04628 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC15.46■□□□□ 0.07
WNT1P04628 DRD5P1-201ENST00000456605 1438 ntBASIC15.46■□□□□ 0.07
WNT1P04628 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
WNT1P04628 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC15.46■□□□□ 0.07
WNT1P04628 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
WNT1P04628 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
WNT1P04628 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC15.46■□□□□ 0.07
WNT1P04628 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
WNT1P04628 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
WNT1P04628 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
WNT1P04628 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC15.46■□□□□ 0.07
WNT1P04628 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC15.46■□□□□ 0.07
WNT1P04628 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC15.46■□□□□ 0.07
WNT1P04628 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC15.46■□□□□ 0.07
WNT1P04628 AC026410.3-201ENST00000514280 936 ntBASIC15.46■□□□□ 0.07
WNT1P04628 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC15.46■□□□□ 0.07
WNT1P04628 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
WNT1P04628 FAM8A2P-201ENST00000528813 1142 ntBASIC15.46■□□□□ 0.07
WNT1P04628 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC15.46■□□□□ 0.07
WNT1P04628 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC15.46■□□□□ 0.07
WNT1P04628 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC15.46■□□□□ 0.07
WNT1P04628 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC15.46■□□□□ 0.07
WNT1P04628 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
WNT1P04628 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
WNT1P04628 MIR6869-201ENST00000619434 62 ntBASIC15.46■□□□□ 0.07
WNT1P04628 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC15.46■□□□□ 0.07
WNT1P04628 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
WNT1P04628 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC15.46■□□□□ 0.07
WNT1P04628 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
WNT1P04628 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
WNT1P04628 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
WNT1P04628 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.06
WNT1P04628 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC15.46■□□□□ 0.06
WNT1P04628 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
WNT1P04628 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.06
WNT1P04628 CYP2AB1P-202ENST00000454440 1456 ntBASIC15.46■□□□□ 0.06
WNT1P04628 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC15.46■□□□□ 0.06
WNT1P04628 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 62.1 ms