Protein–RNA interactions for Protein: P04406

GAPDH, Glyceraldehyde-3-phosphate dehydrogenase, humanhuman

Known RBP Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDHP04406 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC13.32□□□□□ -0.28
GAPDHP04406 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC13.32□□□□□ -0.28
GAPDHP04406 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC13.32□□□□□ -0.28
GAPDHP04406 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
GAPDHP04406 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
GAPDHP04406 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC13.32□□□□□ -0.28
GAPDHP04406 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
GAPDHP04406 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC13.32□□□□□ -0.28
GAPDHP04406 MIR3687-2-201ENST00000577708 61 ntBASIC13.32□□□□□ -0.28
GAPDHP04406 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC13.32□□□□□ -0.28
GAPDHP04406 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
GAPDHP04406 MIR3687-1-201ENST00000614492 61 ntBASIC13.32□□□□□ -0.28
GAPDHP04406 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC13.32□□□□□ -0.28
GAPDHP04406 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC13.32□□□□□ -0.28
GAPDHP04406 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
GAPDHP04406 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
GAPDHP04406 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC13.32□□□□□ -0.28
GAPDHP04406 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC13.32□□□□□ -0.28
GAPDHP04406 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
GAPDHP04406 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
GAPDHP04406 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
GAPDHP04406 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
GAPDHP04406 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
GAPDHP04406 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
GAPDHP04406 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC13.32□□□□□ -0.28
GAPDHP04406 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
GAPDHP04406 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
GAPDHP04406 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
GAPDHP04406 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC13.32□□□□□ -0.28
GAPDHP04406 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
GAPDHP04406 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
GAPDHP04406 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC13.32□□□□□ -0.28
GAPDHP04406 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
GAPDHP04406 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
GAPDHP04406 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC13.31□□□□□ -0.28
GAPDHP04406 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC13.31□□□□□ -0.28
GAPDHP04406 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
GAPDHP04406 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC13.31□□□□□ -0.28
GAPDHP04406 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
GAPDHP04406 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC13.31□□□□□ -0.28
GAPDHP04406 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
GAPDHP04406 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
GAPDHP04406 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC13.31□□□□□ -0.28
GAPDHP04406 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
GAPDHP04406 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
GAPDHP04406 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC13.31□□□□□ -0.28
GAPDHP04406 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
GAPDHP04406 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC13.31□□□□□ -0.28
GAPDHP04406 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC13.31□□□□□ -0.28
GAPDHP04406 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC13.31□□□□□ -0.28
GAPDHP04406 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
GAPDHP04406 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
GAPDHP04406 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
GAPDHP04406 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
GAPDHP04406 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
GAPDHP04406 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
GAPDHP04406 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
GAPDHP04406 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
GAPDHP04406 YBX2P1-201ENST00000394192 760 ntBASIC13.31□□□□□ -0.28
GAPDHP04406 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
GAPDHP04406 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
GAPDHP04406 RN7SL589P-201ENST00000481268 310 ntBASIC13.31□□□□□ -0.28
GAPDHP04406 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC13.31□□□□□ -0.28
GAPDHP04406 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
GAPDHP04406 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC13.31□□□□□ -0.28
GAPDHP04406 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC13.31□□□□□ -0.28
GAPDHP04406 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC13.31□□□□□ -0.28
GAPDHP04406 AL671883.3-201ENST00000603274 991 ntBASIC13.31□□□□□ -0.28
GAPDHP04406 AC099522.2-201ENST00000607001 744 ntBASIC13.31□□□□□ -0.28
GAPDHP04406 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
GAPDHP04406 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
GAPDHP04406 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC13.31□□□□□ -0.28
GAPDHP04406 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
GAPDHP04406 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
GAPDHP04406 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
GAPDHP04406 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC13.31□□□□□ -0.28
GAPDHP04406 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC13.31□□□□□ -0.28
GAPDHP04406 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
GAPDHP04406 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC13.31□□□□□ -0.28
GAPDHP04406 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
GAPDHP04406 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC13.31□□□□□ -0.28
GAPDHP04406 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC13.31□□□□□ -0.28
GAPDHP04406 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC13.31□□□□□ -0.28
GAPDHP04406 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
GAPDHP04406 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
GAPDHP04406 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC13.31□□□□□ -0.28
GAPDHP04406 AC013726.1-201ENST00000563747 2285 ntBASIC13.3□□□□□ -0.28
GAPDHP04406 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
GAPDHP04406 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC13.3□□□□□ -0.28
GAPDHP04406 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC13.3□□□□□ -0.28
GAPDHP04406 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC13.3□□□□□ -0.28
GAPDHP04406 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
GAPDHP04406 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC13.3□□□□□ -0.28
GAPDHP04406 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
GAPDHP04406 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
GAPDHP04406 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC13.3□□□□□ -0.28
GAPDHP04406 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
GAPDHP04406 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
GAPDHP04406 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
GAPDHP04406 OR2I1P-210ENST00000642037 4691 ntBASIC13.3□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms