Protein–RNA interactions for Protein: O75909

CCNK, Cyclin-K, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNKO75909 CPSF1-212ENST00000616140 4494 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CCNKO75909 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
CCNKO75909 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC13.79□□□□□ -0.2
CCNKO75909 SAMD15-201ENST00000216471 2564 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
CCNKO75909 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CCNKO75909 DLG4-203ENST00000399510 3975 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CCNKO75909 SATB2-201ENST00000260926 5318 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CCNKO75909 LDLRAD2-201ENST00000344642 4012 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
CCNKO75909 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC13.79□□□□□ -0.2
CCNKO75909 AFDN-211ENST00000447894 5475 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
CCNKO75909 GNAS-215ENST00000371102 3438 ntTSL 5 BASIC13.79□□□□□ -0.2
CCNKO75909 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CCNKO75909 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CCNKO75909 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CCNKO75909 SNAP29-201ENST00000215730 4287 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CCNKO75909 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CCNKO75909 WDR66-201ENST00000288912 4467 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
CCNKO75909 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC13.79□□□□□ -0.2
CCNKO75909 AC105206.1-202ENST00000314927 2368 ntBASIC13.79□□□□□ -0.2
CCNKO75909 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC13.79□□□□□ -0.2
CCNKO75909 NLRP2B-201ENST00000434992 3194 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
CCNKO75909 STAM2-201ENST00000263904 5701 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CCNKO75909 SMTN-201ENST00000333137 3295 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
CCNKO75909 LSS-211ENST00000522411 2523 ntTSL 2 BASIC13.79□□□□□ -0.2
CCNKO75909 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC13.78□□□□□ -0.2
CCNKO75909 SPPL2B-209ENST00000613503 3456 ntAPPRIS P4 TSL 1 (best) BASIC13.78□□□□□ -0.2
CCNKO75909 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
CCNKO75909 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC13.78□□□□□ -0.2
CCNKO75909 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
CCNKO75909 SH3TC2-202ENST00000502274 2681 ntTSL 2 BASIC13.78□□□□□ -0.2
CCNKO75909 UBE3A-204ENST00000438097 8939 ntAPPRIS P3 TSL 5 BASIC13.78□□□□□ -0.2
CCNKO75909 TNFRSF11A-201ENST00000269485 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
CCNKO75909 SETD1A-201ENST00000262519 6451 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CCNKO75909 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CCNKO75909 SLC22A23-202ENST00000380302 2883 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CCNKO75909 GPER1-203ENST00000397092 2971 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
CCNKO75909 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC13.78□□□□□ -0.2
CCNKO75909 AC011474.4-201ENST00000623523 2076 ntBASIC13.78□□□□□ -0.2
CCNKO75909 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
CCNKO75909 EMC10-201ENST00000334976 9446 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
CCNKO75909 DNAJB6-201ENST00000262177 2527 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
CCNKO75909 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CCNKO75909 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CCNKO75909 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
CCNKO75909 HMGA1P5-201ENST00000412453 271 ntBASIC13.78□□□□□ -0.2
CCNKO75909 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC13.78□□□□□ -0.2
CCNKO75909 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC13.78□□□□□ -0.2
CCNKO75909 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
CCNKO75909 ECEL1P3-201ENST00000427961 737 ntBASIC13.78□□□□□ -0.2
CCNKO75909 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CCNKO75909 AC068472.1-201ENST00000474589 881 ntBASIC13.78□□□□□ -0.2
CCNKO75909 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CCNKO75909 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC13.78□□□□□ -0.2
CCNKO75909 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC13.78□□□□□ -0.2
CCNKO75909 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC13.78□□□□□ -0.2
CCNKO75909 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
CCNKO75909 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CCNKO75909 GLDC-219ENST00000640208 420 ntTSL 2 BASIC13.78□□□□□ -0.2
CCNKO75909 AC097374.2-201ENST00000618617 1306 ntBASIC13.78□□□□□ -0.2
CCNKO75909 STRA6-203ENST00000416286 2750 ntTSL 5 BASIC13.78□□□□□ -0.2
CCNKO75909 USP40-208ENST00000450966 5616 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
CCNKO75909 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
CCNKO75909 GDAP1L1-206ENST00000537864 2855 ntTSL 2 BASIC13.78□□□□□ -0.2
CCNKO75909 ATG3-202ENST00000402314 3010 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CCNKO75909 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CCNKO75909 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CCNKO75909 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC13.78□□□□□ -0.2
CCNKO75909 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CCNKO75909 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CCNKO75909 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CCNKO75909 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC13.78□□□□□ -0.2
CCNKO75909 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CCNKO75909 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC13.78□□□□□ -0.2
CCNKO75909 FURIN-206ENST00000610579 4191 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
CCNKO75909 PRKCSH-212ENST00000591462 2209 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
CCNKO75909 RGS9-210ENST00000635833 2308 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
CCNKO75909 ATG14-201ENST00000247178 4742 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CCNKO75909 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC13.78□□□□□ -0.2
CCNKO75909 TNS2-202ENST00000314276 4944 ntAPPRIS P4 TSL 1 (best) BASIC13.78□□□□□ -0.2
CCNKO75909 SIGLEC16-202ENST00000602139 2510 ntTSL 5 BASIC13.78□□□□□ -0.2
CCNKO75909 MKNK1-203ENST00000371945 2618 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.2
CCNKO75909 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.2
CCNKO75909 PEG13-201ENST00000631594 5667 ntBASIC13.77□□□□□ -0.2
CCNKO75909 FASN-201ENST00000306749 8565 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.2
CCNKO75909 MIRLET7BHG-201ENST00000360737 4560 ntTSL 2 BASIC13.77□□□□□ -0.2
CCNKO75909 KDM2B-202ENST00000377071 4595 ntAPPRIS P4 TSL 1 (best) BASIC13.77□□□□□ -0.2
CCNKO75909 USP19-202ENST00000398888 4559 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.2
CCNKO75909 NOTCH1-201ENST00000277541 9371 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
CCNKO75909 GNB1L-201ENST00000329517 6706 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
CCNKO75909 MGLL-201ENST00000265052 4642 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
CCNKO75909 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CCNKO75909 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CCNKO75909 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
CCNKO75909 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
CCNKO75909 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC13.77□□□□□ -0.21
CCNKO75909 SFMBT2-203ENST00000379713 2402 ntTSL 2 BASIC13.77□□□□□ -0.21
CCNKO75909 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CCNKO75909 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CCNKO75909 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC13.77□□□□□ -0.21
CCNKO75909 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC13.77□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms