Protein–RNA interactions for Protein: O43889

CREB3, Cyclic AMP-responsive element-binding protein 3, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CREB3O43889 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC16.6■□□□□ 0.25
CREB3O43889 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC16.6■□□□□ 0.25
CREB3O43889 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC16.6■□□□□ 0.25
CREB3O43889 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CREB3O43889 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CREB3O43889 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
CREB3O43889 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CREB3O43889 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CREB3O43889 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC16.6■□□□□ 0.25
CREB3O43889 AP005117.1-202ENST00000581724 1908 ntBASIC16.6■□□□□ 0.25
CREB3O43889 AC011477.6-201ENST00000604980 1927 ntBASIC16.6■□□□□ 0.25
CREB3O43889 AC018892.3-201ENST00000623986 2499 ntBASIC16.6■□□□□ 0.25
CREB3O43889 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CREB3O43889 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CREB3O43889 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC16.6■□□□□ 0.25
CREB3O43889 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CREB3O43889 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CREB3O43889 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
CREB3O43889 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CREB3O43889 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CREB3O43889 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC16.6■□□□□ 0.25
CREB3O43889 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
CREB3O43889 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CREB3O43889 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CREB3O43889 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
CREB3O43889 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC16.59■□□□□ 0.25
CREB3O43889 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CREB3O43889 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC16.59■□□□□ 0.25
CREB3O43889 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
CREB3O43889 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC16.59■□□□□ 0.25
CREB3O43889 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
CREB3O43889 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC16.59■□□□□ 0.25
CREB3O43889 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CREB3O43889 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
CREB3O43889 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC16.59■□□□□ 0.25
CREB3O43889 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CREB3O43889 RBM39-205ENST00000397370 612 ntTSL 2 BASIC16.59■□□□□ 0.25
CREB3O43889 PPP6R2P1-201ENST00000450880 1275 ntBASIC16.59■□□□□ 0.25
CREB3O43889 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC16.59■□□□□ 0.25
CREB3O43889 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CREB3O43889 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC16.59■□□□□ 0.25
CREB3O43889 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC16.59■□□□□ 0.25
CREB3O43889 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC16.59■□□□□ 0.25
CREB3O43889 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC16.59■□□□□ 0.25
CREB3O43889 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CREB3O43889 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC16.59■□□□□ 0.25
CREB3O43889 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC16.59■□□□□ 0.25
CREB3O43889 COQ9-214ENST00000567933 882 ntTSL 3 BASIC16.59■□□□□ 0.25
CREB3O43889 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CREB3O43889 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC16.59■□□□□ 0.25
CREB3O43889 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
CREB3O43889 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
CREB3O43889 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
CREB3O43889 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
CREB3O43889 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CREB3O43889 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CREB3O43889 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC16.59■□□□□ 0.25
CREB3O43889 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC16.59■□□□□ 0.25
CREB3O43889 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
CREB3O43889 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CREB3O43889 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC16.59■□□□□ 0.25
CREB3O43889 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC16.59■□□□□ 0.25
CREB3O43889 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
CREB3O43889 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
CREB3O43889 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
CREB3O43889 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
CREB3O43889 LRRFIP1P1-201ENST00000498774 2246 ntBASIC16.58■□□□□ 0.25
CREB3O43889 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC16.58■□□□□ 0.25
CREB3O43889 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC16.58■□□□□ 0.25
CREB3O43889 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
CREB3O43889 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
CREB3O43889 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC16.58■□□□□ 0.25
CREB3O43889 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
CREB3O43889 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC16.58■□□□□ 0.25
CREB3O43889 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.25
CREB3O43889 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CREB3O43889 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC16.58■□□□□ 0.24
CREB3O43889 CNN2P2-201ENST00000443536 909 ntBASIC16.58■□□□□ 0.24
CREB3O43889 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC16.58■□□□□ 0.24
CREB3O43889 CNN2P3-201ENST00000450201 906 ntBASIC16.58■□□□□ 0.24
CREB3O43889 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CREB3O43889 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC16.58■□□□□ 0.24
CREB3O43889 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CREB3O43889 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CREB3O43889 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC16.58■□□□□ 0.24
CREB3O43889 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
CREB3O43889 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC16.58■□□□□ 0.24
CREB3O43889 LSM12-202ENST00000585388 942 ntTSL 3 BASIC16.58■□□□□ 0.24
CREB3O43889 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC16.58■□□□□ 0.24
CREB3O43889 AL136317.3-201ENST00000618497 906 ntBASIC16.58■□□□□ 0.24
CREB3O43889 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC16.58■□□□□ 0.24
CREB3O43889 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC16.58■□□□□ 0.24
CREB3O43889 TUBB3P1-201ENST00000405796 1332 ntBASIC16.58■□□□□ 0.24
CREB3O43889 AL035456.1-201ENST00000456064 1369 ntBASIC16.58■□□□□ 0.24
CREB3O43889 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
CREB3O43889 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CREB3O43889 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC16.58■□□□□ 0.24
CREB3O43889 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CREB3O43889 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CREB3O43889 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC16.58■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms