Protein–RNA interactions for Protein: O15239

NDUFA1, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA1O15239 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
NDUFA1O15239 CICP4-201ENST00000447359 2812 ntBASIC10.9□□□□□ -0.66
NDUFA1O15239 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC10.9□□□□□ -0.66
NDUFA1O15239 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC10.9□□□□□ -0.66
NDUFA1O15239 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC10.9□□□□□ -0.66
NDUFA1O15239 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC10.9□□□□□ -0.66
NDUFA1O15239 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
NDUFA1O15239 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
NDUFA1O15239 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
NDUFA1O15239 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
NDUFA1O15239 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC10.9□□□□□ -0.66
NDUFA1O15239 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
NDUFA1O15239 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.67
NDUFA1O15239 LINC00174-204ENST00000421767 4702 ntTSL 5 BASIC10.9□□□□□ -0.67
NDUFA1O15239 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC10.9□□□□□ -0.67
NDUFA1O15239 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
NDUFA1O15239 UMODL1-206ENST00000408989 5262 ntAPPRIS P4 TSL 1 (best) BASIC10.9□□□□□ -0.67
NDUFA1O15239 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC10.9□□□□□ -0.67
NDUFA1O15239 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC10.9□□□□□ -0.67
NDUFA1O15239 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC10.9□□□□□ -0.67
NDUFA1O15239 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
NDUFA1O15239 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC10.9□□□□□ -0.67
NDUFA1O15239 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC10.9□□□□□ -0.67
NDUFA1O15239 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC10.9□□□□□ -0.67
NDUFA1O15239 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
NDUFA1O15239 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC10.89□□□□□ -0.67
NDUFA1O15239 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
NDUFA1O15239 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC10.89□□□□□ -0.67
NDUFA1O15239 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC10.89□□□□□ -0.67
NDUFA1O15239 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC10.89□□□□□ -0.67
NDUFA1O15239 PCDHA11-201ENST00000398640 6115 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
NDUFA1O15239 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC10.89□□□□□ -0.67
NDUFA1O15239 IKZF1-205ENST00000357364 5925 ntTSL 5 BASIC10.89□□□□□ -0.67
NDUFA1O15239 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
NDUFA1O15239 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC10.89□□□□□ -0.67
NDUFA1O15239 AC104581.4-201ENST00000623126 3052 ntBASIC10.89□□□□□ -0.67
NDUFA1O15239 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
NDUFA1O15239 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
NDUFA1O15239 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
NDUFA1O15239 UMODL1-204ENST00000400427 5442 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
NDUFA1O15239 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC10.89□□□□□ -0.67
NDUFA1O15239 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
NDUFA1O15239 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
NDUFA1O15239 AKR1C7P-201ENST00000305623 895 ntBASIC10.89□□□□□ -0.67
NDUFA1O15239 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
NDUFA1O15239 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
NDUFA1O15239 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC10.89□□□□□ -0.67
NDUFA1O15239 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC10.89□□□□□ -0.67
NDUFA1O15239 KRT18P27-201ENST00000427733 1299 ntBASIC10.89□□□□□ -0.67
NDUFA1O15239 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC10.89□□□□□ -0.67
NDUFA1O15239 AF186996.4-201ENST00000467186 377 ntBASIC10.89□□□□□ -0.67
NDUFA1O15239 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC10.89□□□□□ -0.67
NDUFA1O15239 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC10.89□□□□□ -0.67
NDUFA1O15239 MTRF1LP2-201ENST00000506027 1122 ntBASIC10.89□□□□□ -0.67
NDUFA1O15239 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
NDUFA1O15239 AL160237.2-201ENST00000556165 472 ntBASIC10.89□□□□□ -0.67
NDUFA1O15239 RPS29-206ENST00000557111 488 ntTSL 2 BASIC10.89□□□□□ -0.67
NDUFA1O15239 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC10.89□□□□□ -0.67
NDUFA1O15239 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC10.89□□□□□ -0.67
NDUFA1O15239 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC10.89□□□□□ -0.67
NDUFA1O15239 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
NDUFA1O15239 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC10.89□□□□□ -0.67
NDUFA1O15239 IFNL4P1-201ENST00000607083 540 ntBASIC10.89□□□□□ -0.67
NDUFA1O15239 AC021097.1-201ENST00000607902 574 ntBASIC10.89□□□□□ -0.67
NDUFA1O15239 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
NDUFA1O15239 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC10.89□□□□□ -0.67
NDUFA1O15239 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC10.89□□□□□ -0.67
NDUFA1O15239 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
NDUFA1O15239 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
NDUFA1O15239 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC10.89□□□□□ -0.67
NDUFA1O15239 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC10.89□□□□□ -0.67
NDUFA1O15239 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
NDUFA1O15239 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC10.89□□□□□ -0.67
NDUFA1O15239 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC10.89□□□□□ -0.67
NDUFA1O15239 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC10.89□□□□□ -0.67
NDUFA1O15239 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
NDUFA1O15239 TICRR-202ENST00000560985 6656 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
NDUFA1O15239 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC10.89□□□□□ -0.67
NDUFA1O15239 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
NDUFA1O15239 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
NDUFA1O15239 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
NDUFA1O15239 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
NDUFA1O15239 COL4A3-202ENST00000396578 8097 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
NDUFA1O15239 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
NDUFA1O15239 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC10.89□□□□□ -0.67
NDUFA1O15239 LMX1B-202ENST00000373474 5797 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
NDUFA1O15239 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
NDUFA1O15239 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
NDUFA1O15239 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC10.89□□□□□ -0.67
NDUFA1O15239 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC10.89□□□□□ -0.67
NDUFA1O15239 OR2C3-201ENST00000366487 8467 ntAPPRIS P1 BASIC10.89□□□□□ -0.67
NDUFA1O15239 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
NDUFA1O15239 AC126365.1-201ENST00000578585 1514 ntBASIC10.89□□□□□ -0.67
NDUFA1O15239 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC10.89□□□□□ -0.67
NDUFA1O15239 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC10.88□□□□□ -0.67
NDUFA1O15239 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC10.88□□□□□ -0.67
NDUFA1O15239 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
NDUFA1O15239 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
NDUFA1O15239 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
NDUFA1O15239 C4B-201ENST00000425700 5237 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms