Protein–RNA interactions for Protein: O14983

ATP2A1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A1O14983 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
ATP2A1O14983 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
ATP2A1O14983 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
ATP2A1O14983 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
ATP2A1O14983 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
ATP2A1O14983 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC18.05■□□□□ 0.48
ATP2A1O14983 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
ATP2A1O14983 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
ATP2A1O14983 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
ATP2A1O14983 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC18.05■□□□□ 0.48
ATP2A1O14983 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
ATP2A1O14983 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
ATP2A1O14983 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
ATP2A1O14983 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
ATP2A1O14983 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC18.05■□□□□ 0.48
ATP2A1O14983 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC18.05■□□□□ 0.48
ATP2A1O14983 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC18.05■□□□□ 0.48
ATP2A1O14983 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
ATP2A1O14983 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
ATP2A1O14983 AL133267.1-201ENST00000398220 340 ntBASIC18.05■□□□□ 0.48
ATP2A1O14983 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
ATP2A1O14983 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC18.05■□□□□ 0.48
ATP2A1O14983 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
ATP2A1O14983 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC18.05■□□□□ 0.48
ATP2A1O14983 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
ATP2A1O14983 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC18.05■□□□□ 0.48
ATP2A1O14983 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC18.05■□□□□ 0.48
ATP2A1O14983 GPX4-206ENST00000588919 803 ntTSL 2 BASIC18.05■□□□□ 0.48
ATP2A1O14983 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
ATP2A1O14983 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC18.05■□□□□ 0.48
ATP2A1O14983 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
ATP2A1O14983 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
ATP2A1O14983 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
ATP2A1O14983 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
ATP2A1O14983 TP73-213ENST00000604479 1623 ntTSL 5 BASIC18.05■□□□□ 0.48
ATP2A1O14983 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
ATP2A1O14983 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
ATP2A1O14983 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC18.04■□□□□ 0.48
ATP2A1O14983 MTHFR-217ENST00000641820 1569 ntBASIC18.04■□□□□ 0.48
ATP2A1O14983 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
ATP2A1O14983 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
ATP2A1O14983 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
ATP2A1O14983 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC18.04■□□□□ 0.48
ATP2A1O14983 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
ATP2A1O14983 PDIA3P1-201ENST00000471856 1510 ntBASIC18.04■□□□□ 0.48
ATP2A1O14983 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
ATP2A1O14983 AC018892.3-201ENST00000623986 2499 ntBASIC18.04■□□□□ 0.48
ATP2A1O14983 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
ATP2A1O14983 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
ATP2A1O14983 TK1-203ENST00000588734 1681 ntTSL 2 BASIC18.04■□□□□ 0.48
ATP2A1O14983 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
ATP2A1O14983 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC18.04■□□□□ 0.48
ATP2A1O14983 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC18.04■□□□□ 0.48
ATP2A1O14983 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC18.04■□□□□ 0.48
ATP2A1O14983 AP001063.1-201ENST00000568332 529 ntBASIC18.04■□□□□ 0.48
ATP2A1O14983 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
ATP2A1O14983 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
ATP2A1O14983 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
ATP2A1O14983 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC18.04■□□□□ 0.48
ATP2A1O14983 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
ATP2A1O14983 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC18.04■□□□□ 0.48
ATP2A1O14983 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
ATP2A1O14983 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
ATP2A1O14983 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
ATP2A1O14983 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
ATP2A1O14983 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
ATP2A1O14983 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
ATP2A1O14983 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
ATP2A1O14983 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC18.04■□□□□ 0.48
ATP2A1O14983 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
ATP2A1O14983 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC18.04■□□□□ 0.48
ATP2A1O14983 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
ATP2A1O14983 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
ATP2A1O14983 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC18.03■□□□□ 0.48
ATP2A1O14983 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
ATP2A1O14983 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
ATP2A1O14983 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
ATP2A1O14983 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
ATP2A1O14983 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
ATP2A1O14983 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
ATP2A1O14983 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC18.03■□□□□ 0.48
ATP2A1O14983 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
ATP2A1O14983 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
ATP2A1O14983 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
ATP2A1O14983 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
ATP2A1O14983 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
ATP2A1O14983 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
ATP2A1O14983 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
ATP2A1O14983 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
ATP2A1O14983 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC18.03■□□□□ 0.48
ATP2A1O14983 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
ATP2A1O14983 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
ATP2A1O14983 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
ATP2A1O14983 TEX30-203ENST00000376022 828 ntTSL 2 BASIC18.03■□□□□ 0.48
ATP2A1O14983 BRF1-202ENST00000379932 884 ntTSL 5 BASIC18.03■□□□□ 0.48
ATP2A1O14983 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
ATP2A1O14983 AC092933.1-201ENST00000393644 945 ntBASIC18.03■□□□□ 0.48
ATP2A1O14983 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC18.03■□□□□ 0.48
ATP2A1O14983 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
ATP2A1O14983 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms