Protein–RNA interactions for Protein: A7MD48

SRRM4, Serine/arginine repetitive matrix protein 4, humanhuman

Known RBP Predictions only

Length 611 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4A7MD48 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SRRM4A7MD48 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SRRM4A7MD48 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SRRM4A7MD48 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC12.78□□□□□ -0.36
SRRM4A7MD48 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SRRM4A7MD48 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC12.78□□□□□ -0.36
SRRM4A7MD48 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
SRRM4A7MD48 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
SRRM4A7MD48 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
SRRM4A7MD48 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SRRM4A7MD48 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
SRRM4A7MD48 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SRRM4A7MD48 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC12.78□□□□□ -0.36
SRRM4A7MD48 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC12.78□□□□□ -0.36
SRRM4A7MD48 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
SRRM4A7MD48 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
SRRM4A7MD48 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
SRRM4A7MD48 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
SRRM4A7MD48 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
SRRM4A7MD48 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
SRRM4A7MD48 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.36
SRRM4A7MD48 AC063926.3-201ENST00000624734 5658 ntBASIC12.77□□□□□ -0.36
SRRM4A7MD48 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.36
SRRM4A7MD48 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
SRRM4A7MD48 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC12.77□□□□□ -0.37
SRRM4A7MD48 AC068587.6-202ENST00000641839 5619 ntBASIC12.77□□□□□ -0.37
SRRM4A7MD48 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
SRRM4A7MD48 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
SRRM4A7MD48 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC12.77□□□□□ -0.37
SRRM4A7MD48 KRT18P32-201ENST00000424695 1287 ntBASIC12.77□□□□□ -0.37
SRRM4A7MD48 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
SRRM4A7MD48 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC12.77□□□□□ -0.37
SRRM4A7MD48 GATD1-206ENST00000526325 756 ntTSL 5 BASIC12.77□□□□□ -0.37
SRRM4A7MD48 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC12.77□□□□□ -0.37
SRRM4A7MD48 MIR3687-2-201ENST00000577708 61 ntBASIC12.77□□□□□ -0.37
SRRM4A7MD48 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC12.77□□□□□ -0.37
SRRM4A7MD48 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
SRRM4A7MD48 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
SRRM4A7MD48 AC097359.3-201ENST00000603982 1210 ntBASIC12.77□□□□□ -0.37
SRRM4A7MD48 MIR3687-1-201ENST00000614492 61 ntBASIC12.77□□□□□ -0.37
SRRM4A7MD48 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
SRRM4A7MD48 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
SRRM4A7MD48 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
SRRM4A7MD48 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
SRRM4A7MD48 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC12.77□□□□□ -0.37
SRRM4A7MD48 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
SRRM4A7MD48 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
SRRM4A7MD48 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
SRRM4A7MD48 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
SRRM4A7MD48 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
SRRM4A7MD48 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
SRRM4A7MD48 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
SRRM4A7MD48 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
SRRM4A7MD48 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
SRRM4A7MD48 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
SRRM4A7MD48 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
SRRM4A7MD48 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC12.77□□□□□ -0.37
SRRM4A7MD48 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
SRRM4A7MD48 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
SRRM4A7MD48 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
SRRM4A7MD48 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC12.77□□□□□ -0.37
SRRM4A7MD48 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
SRRM4A7MD48 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
SRRM4A7MD48 C18orf15-201ENST00000623680 2534 ntBASIC12.77□□□□□ -0.37
SRRM4A7MD48 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SRRM4A7MD48 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SRRM4A7MD48 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC12.76□□□□□ -0.37
SRRM4A7MD48 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC12.76□□□□□ -0.37
SRRM4A7MD48 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SRRM4A7MD48 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SRRM4A7MD48 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
SRRM4A7MD48 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SRRM4A7MD48 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
SRRM4A7MD48 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SRRM4A7MD48 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
SRRM4A7MD48 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SRRM4A7MD48 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SRRM4A7MD48 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
SRRM4A7MD48 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SRRM4A7MD48 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC12.76□□□□□ -0.37
SRRM4A7MD48 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC12.76□□□□□ -0.37
SRRM4A7MD48 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
SRRM4A7MD48 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SRRM4A7MD48 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC12.76□□□□□ -0.37
SRRM4A7MD48 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SRRM4A7MD48 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC12.76□□□□□ -0.37
SRRM4A7MD48 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
SRRM4A7MD48 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC12.76□□□□□ -0.37
SRRM4A7MD48 RBPMS2P1-201ENST00000437762 623 ntBASIC12.76□□□□□ -0.37
SRRM4A7MD48 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC12.76□□□□□ -0.37
SRRM4A7MD48 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC12.76□□□□□ -0.37
SRRM4A7MD48 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC12.76□□□□□ -0.37
SRRM4A7MD48 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC12.76□□□□□ -0.37
SRRM4A7MD48 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
SRRM4A7MD48 AC105021.1-202ENST00000570572 669 ntBASIC12.76□□□□□ -0.37
SRRM4A7MD48 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC12.76□□□□□ -0.37
SRRM4A7MD48 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC12.76□□□□□ -0.37
SRRM4A7MD48 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC12.76□□□□□ -0.37
SRRM4A7MD48 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC12.76□□□□□ -0.37
SRRM4A7MD48 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms