Protein–RNA interactions for Protein: A0A075B6X5

TRAV18, T-cell receptor alpha variable 18 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV18A0A075B6X5 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC13.7□□□□□ -0.22
TRAV18A0A075B6X5 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRAV18A0A075B6X5 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRAV18A0A075B6X5 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRAV18A0A075B6X5 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
TRAV18A0A075B6X5 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC13.7□□□□□ -0.22
TRAV18A0A075B6X5 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRAV18A0A075B6X5 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRAV18A0A075B6X5 AC126365.1-201ENST00000578585 1514 ntBASIC13.69□□□□□ -0.22
TRAV18A0A075B6X5 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRAV18A0A075B6X5 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
TRAV18A0A075B6X5 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRAV18A0A075B6X5 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRAV18A0A075B6X5 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRAV18A0A075B6X5 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRAV18A0A075B6X5 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC13.69□□□□□ -0.22
TRAV18A0A075B6X5 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRAV18A0A075B6X5 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRAV18A0A075B6X5 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRAV18A0A075B6X5 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
TRAV18A0A075B6X5 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
TRAV18A0A075B6X5 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRAV18A0A075B6X5 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
TRAV18A0A075B6X5 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRAV18A0A075B6X5 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRAV18A0A075B6X5 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRAV18A0A075B6X5 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRAV18A0A075B6X5 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRAV18A0A075B6X5 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRAV18A0A075B6X5 ATP5G2P1-201ENST00000433580 426 ntBASIC13.69□□□□□ -0.22
TRAV18A0A075B6X5 AC136632.2-201ENST00000512891 861 ntBASIC13.69□□□□□ -0.22
TRAV18A0A075B6X5 AC021087.4-201ENST00000563761 564 ntBASIC13.69□□□□□ -0.22
TRAV18A0A075B6X5 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRAV18A0A075B6X5 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
TRAV18A0A075B6X5 MIR3909-201ENST00000579518 119 ntBASIC13.69□□□□□ -0.22
TRAV18A0A075B6X5 AP000550.4-202ENST00000639755 178 ntBASIC13.69□□□□□ -0.22
TRAV18A0A075B6X5 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC13.69□□□□□ -0.22
TRAV18A0A075B6X5 AC107918.4-202ENST00000641623 219 ntBASIC13.69□□□□□ -0.22
TRAV18A0A075B6X5 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC13.69□□□□□ -0.22
TRAV18A0A075B6X5 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC13.69□□□□□ -0.22
TRAV18A0A075B6X5 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRAV18A0A075B6X5 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
TRAV18A0A075B6X5 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC13.69□□□□□ -0.22
TRAV18A0A075B6X5 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
TRAV18A0A075B6X5 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
TRAV18A0A075B6X5 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRAV18A0A075B6X5 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRAV18A0A075B6X5 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC13.69□□□□□ -0.22
TRAV18A0A075B6X5 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
TRAV18A0A075B6X5 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
TRAV18A0A075B6X5 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRAV18A0A075B6X5 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
TRAV18A0A075B6X5 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC13.69□□□□□ -0.22
TRAV18A0A075B6X5 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRAV18A0A075B6X5 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRAV18A0A075B6X5 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC13.69□□□□□ -0.22
TRAV18A0A075B6X5 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
TRAV18A0A075B6X5 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRAV18A0A075B6X5 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC13.69□□□□□ -0.22
TRAV18A0A075B6X5 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC13.68□□□□□ -0.22
TRAV18A0A075B6X5 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
TRAV18A0A075B6X5 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC13.68□□□□□ -0.22
TRAV18A0A075B6X5 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC13.68□□□□□ -0.22
TRAV18A0A075B6X5 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
TRAV18A0A075B6X5 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
TRAV18A0A075B6X5 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC13.68□□□□□ -0.22
TRAV18A0A075B6X5 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
TRAV18A0A075B6X5 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC13.68□□□□□ -0.22
TRAV18A0A075B6X5 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
TRAV18A0A075B6X5 FGD5P1-202ENST00000614866 2498 ntBASIC13.68□□□□□ -0.22
TRAV18A0A075B6X5 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TRAV18A0A075B6X5 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
TRAV18A0A075B6X5 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TRAV18A0A075B6X5 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC13.68□□□□□ -0.22
TRAV18A0A075B6X5 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
TRAV18A0A075B6X5 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
TRAV18A0A075B6X5 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC13.68□□□□□ -0.22
TRAV18A0A075B6X5 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
TRAV18A0A075B6X5 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TRAV18A0A075B6X5 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
TRAV18A0A075B6X5 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC13.68□□□□□ -0.22
TRAV18A0A075B6X5 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC13.68□□□□□ -0.22
TRAV18A0A075B6X5 MIR4321-201ENST00000592276 80 ntBASIC13.68□□□□□ -0.22
TRAV18A0A075B6X5 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC13.68□□□□□ -0.22
TRAV18A0A075B6X5 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
TRAV18A0A075B6X5 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TRAV18A0A075B6X5 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC13.68□□□□□ -0.22
TRAV18A0A075B6X5 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC13.68□□□□□ -0.22
TRAV18A0A075B6X5 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
TRAV18A0A075B6X5 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
TRAV18A0A075B6X5 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC13.68□□□□□ -0.22
TRAV18A0A075B6X5 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
TRAV18A0A075B6X5 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
TRAV18A0A075B6X5 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TRAV18A0A075B6X5 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
TRAV18A0A075B6X5 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TRAV18A0A075B6X5 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
TRAV18A0A075B6X5 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
TRAV18A0A075B6X5 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TRAV18A0A075B6X5 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC13.68□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 92.5 ms