Protein–RNA interactions for Protein: Q9Y6B7

AP4B1, AP-4 complex subunit beta-1, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4B1Q9Y6B7 MARS-233ENST00000628866 2583 ntTSL 5 BASIC15.32■□□□□ 0.04
AP4B1Q9Y6B7 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
AP4B1Q9Y6B7 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC15.32■□□□□ 0.04
AP4B1Q9Y6B7 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
AP4B1Q9Y6B7 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC15.32■□□□□ 0.04
AP4B1Q9Y6B7 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
AP4B1Q9Y6B7 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
AP4B1Q9Y6B7 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC15.32■□□□□ 0.04
AP4B1Q9Y6B7 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC15.32■□□□□ 0.04
AP4B1Q9Y6B7 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
AP4B1Q9Y6B7 TK2-221ENST00000620035 5060 ntTSL 2 BASIC15.32■□□□□ 0.04
AP4B1Q9Y6B7 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
AP4B1Q9Y6B7 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
AP4B1Q9Y6B7 AC013726.1-201ENST00000563747 2285 ntBASIC15.32■□□□□ 0.04
AP4B1Q9Y6B7 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
AP4B1Q9Y6B7 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC15.32■□□□□ 0.04
AP4B1Q9Y6B7 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
AP4B1Q9Y6B7 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
AP4B1Q9Y6B7 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
AP4B1Q9Y6B7 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
AP4B1Q9Y6B7 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC15.32■□□□□ 0.04
AP4B1Q9Y6B7 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
AP4B1Q9Y6B7 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC15.32■□□□□ 0.04
AP4B1Q9Y6B7 HNRNPA1P28-201ENST00000424481 961 ntBASIC15.32■□□□□ 0.04
AP4B1Q9Y6B7 FAM185BP-201ENST00000443595 716 ntBASIC15.32■□□□□ 0.04
AP4B1Q9Y6B7 CXCL1P1-201ENST00000502804 216 ntBASIC15.32■□□□□ 0.04
AP4B1Q9Y6B7 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC15.32■□□□□ 0.04
AP4B1Q9Y6B7 POLD4-207ENST00000531239 584 ntTSL 2 BASIC15.32■□□□□ 0.04
AP4B1Q9Y6B7 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC15.32■□□□□ 0.04
AP4B1Q9Y6B7 AC040169.1-201ENST00000565382 521 ntBASIC15.32■□□□□ 0.04
AP4B1Q9Y6B7 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC15.32■□□□□ 0.04
AP4B1Q9Y6B7 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC15.32■□□□□ 0.04
AP4B1Q9Y6B7 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
AP4B1Q9Y6B7 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
AP4B1Q9Y6B7 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
AP4B1Q9Y6B7 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
AP4B1Q9Y6B7 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC15.32■□□□□ 0.04
AP4B1Q9Y6B7 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
AP4B1Q9Y6B7 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC15.32■□□□□ 0.04
AP4B1Q9Y6B7 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC15.32■□□□□ 0.04
AP4B1Q9Y6B7 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
AP4B1Q9Y6B7 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC15.32■□□□□ 0.04
AP4B1Q9Y6B7 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
AP4B1Q9Y6B7 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
AP4B1Q9Y6B7 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
AP4B1Q9Y6B7 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
AP4B1Q9Y6B7 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
AP4B1Q9Y6B7 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC15.31■□□□□ 0.04
AP4B1Q9Y6B7 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
AP4B1Q9Y6B7 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
AP4B1Q9Y6B7 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
AP4B1Q9Y6B7 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
AP4B1Q9Y6B7 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC15.31■□□□□ 0.04
AP4B1Q9Y6B7 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC15.31■□□□□ 0.04
AP4B1Q9Y6B7 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
AP4B1Q9Y6B7 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
AP4B1Q9Y6B7 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
AP4B1Q9Y6B7 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC15.31■□□□□ 0.04
AP4B1Q9Y6B7 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
AP4B1Q9Y6B7 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC15.31■□□□□ 0.04
AP4B1Q9Y6B7 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
AP4B1Q9Y6B7 FABP5-202ENST00000396359 986 ntTSL 5 BASIC15.31■□□□□ 0.04
AP4B1Q9Y6B7 IGLL3P-201ENST00000412472 434 ntBASIC15.31■□□□□ 0.04
AP4B1Q9Y6B7 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC15.31■□□□□ 0.04
AP4B1Q9Y6B7 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC15.31■□□□□ 0.04
AP4B1Q9Y6B7 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC15.31■□□□□ 0.04
AP4B1Q9Y6B7 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC15.31■□□□□ 0.04
AP4B1Q9Y6B7 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC15.31■□□□□ 0.04
AP4B1Q9Y6B7 AC007064.4-201ENST00000637740 555 ntBASIC15.31■□□□□ 0.04
AP4B1Q9Y6B7 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
AP4B1Q9Y6B7 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
AP4B1Q9Y6B7 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC15.31■□□□□ 0.04
AP4B1Q9Y6B7 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
AP4B1Q9Y6B7 PCDHA3-202ENST00000532566 4594 ntBASIC15.31■□□□□ 0.04
AP4B1Q9Y6B7 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
AP4B1Q9Y6B7 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC15.31■□□□□ 0.04
AP4B1Q9Y6B7 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC15.31■□□□□ 0.04
AP4B1Q9Y6B7 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
AP4B1Q9Y6B7 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
AP4B1Q9Y6B7 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
AP4B1Q9Y6B7 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
AP4B1Q9Y6B7 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
AP4B1Q9Y6B7 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
AP4B1Q9Y6B7 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
AP4B1Q9Y6B7 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC15.31■□□□□ 0.04
AP4B1Q9Y6B7 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC15.3■□□□□ 0.04
AP4B1Q9Y6B7 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC15.3■□□□□ 0.04
AP4B1Q9Y6B7 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
AP4B1Q9Y6B7 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
AP4B1Q9Y6B7 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
AP4B1Q9Y6B7 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
AP4B1Q9Y6B7 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
AP4B1Q9Y6B7 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
AP4B1Q9Y6B7 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
AP4B1Q9Y6B7 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
AP4B1Q9Y6B7 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
AP4B1Q9Y6B7 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
AP4B1Q9Y6B7 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
AP4B1Q9Y6B7 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
AP4B1Q9Y6B7 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC15.3■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms