Protein–RNA interactions for Protein: Q9Y587

AP4S1, AP-4 complex subunit sigma-1, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4S1Q9Y587 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
AP4S1Q9Y587 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC15.05■□□□□ -0
AP4S1Q9Y587 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
AP4S1Q9Y587 AL596275.1-201ENST00000423464 877 ntBASIC15.05■□□□□ -0
AP4S1Q9Y587 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC15.05■□□□□ -0
AP4S1Q9Y587 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC15.05■□□□□ -0
AP4S1Q9Y587 AC104819.1-201ENST00000504587 486 ntBASIC15.05■□□□□ -0
AP4S1Q9Y587 MTRF1LP2-201ENST00000506027 1122 ntBASIC15.05■□□□□ -0
AP4S1Q9Y587 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC15.05■□□□□ -0
AP4S1Q9Y587 RBM42-202ENST00000586618 771 ntTSL 3 BASIC15.05■□□□□ -0
AP4S1Q9Y587 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
AP4S1Q9Y587 AC091076.1-201ENST00000610741 619 ntBASIC15.05■□□□□ -0
AP4S1Q9Y587 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
AP4S1Q9Y587 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
AP4S1Q9Y587 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
AP4S1Q9Y587 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC15.05■□□□□ -0
AP4S1Q9Y587 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
AP4S1Q9Y587 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
AP4S1Q9Y587 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
AP4S1Q9Y587 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC15.05■□□□□ -0
AP4S1Q9Y587 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
AP4S1Q9Y587 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
AP4S1Q9Y587 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
AP4S1Q9Y587 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
AP4S1Q9Y587 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
AP4S1Q9Y587 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
AP4S1Q9Y587 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
AP4S1Q9Y587 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
AP4S1Q9Y587 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
AP4S1Q9Y587 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
AP4S1Q9Y587 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC15.04■□□□□ -0
AP4S1Q9Y587 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
AP4S1Q9Y587 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
AP4S1Q9Y587 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
AP4S1Q9Y587 OS9-204ENST00000389146 2091 ntTSL 2 BASIC15.04■□□□□ -0
AP4S1Q9Y587 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
AP4S1Q9Y587 ZBED1P1-201ENST00000502364 1930 ntBASIC15.04■□□□□ -0
AP4S1Q9Y587 AC127383.1-201ENST00000444697 1800 ntBASIC15.04■□□□□ -0
AP4S1Q9Y587 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
AP4S1Q9Y587 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC15.04■□□□□ -0
AP4S1Q9Y587 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
AP4S1Q9Y587 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
AP4S1Q9Y587 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
AP4S1Q9Y587 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
AP4S1Q9Y587 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC15.04■□□□□ -0
AP4S1Q9Y587 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC15.04■□□□□ -0
AP4S1Q9Y587 AP002383.4-201ENST00000442518 975 ntBASIC15.04■□□□□ -0
AP4S1Q9Y587 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC15.04■□□□□ -0
AP4S1Q9Y587 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC15.04■□□□□ -0
AP4S1Q9Y587 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC15.04■□□□□ -0
AP4S1Q9Y587 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC15.04■□□□□ -0
AP4S1Q9Y587 AP002414.4-201ENST00000589764 1148 ntBASIC15.04■□□□□ -0
AP4S1Q9Y587 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
AP4S1Q9Y587 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
AP4S1Q9Y587 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
AP4S1Q9Y587 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC15.04■□□□□ -0
AP4S1Q9Y587 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC15.04■□□□□ -0
AP4S1Q9Y587 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
AP4S1Q9Y587 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
AP4S1Q9Y587 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC15.04■□□□□ -0
AP4S1Q9Y587 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC15.04■□□□□ -0
AP4S1Q9Y587 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
AP4S1Q9Y587 STRN-202ENST00000379213 2254 ntTSL 5 BASIC15.04■□□□□ -0
AP4S1Q9Y587 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC15.04■□□□□ -0
AP4S1Q9Y587 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC15.04■□□□□ -0
AP4S1Q9Y587 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC15.04■□□□□ -0
AP4S1Q9Y587 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
AP4S1Q9Y587 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC15.04■□□□□ -0
AP4S1Q9Y587 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
AP4S1Q9Y587 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC15.04■□□□□ -0
AP4S1Q9Y587 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC15.04■□□□□ -0
AP4S1Q9Y587 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
AP4S1Q9Y587 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
AP4S1Q9Y587 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
AP4S1Q9Y587 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC15.03■□□□□ -0
AP4S1Q9Y587 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
AP4S1Q9Y587 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC15.03■□□□□ -0
AP4S1Q9Y587 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
AP4S1Q9Y587 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC15.03■□□□□ -0
AP4S1Q9Y587 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC15.03■□□□□ -0
AP4S1Q9Y587 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
AP4S1Q9Y587 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC15.03■□□□□ -0
AP4S1Q9Y587 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC15.03■□□□□ -0
AP4S1Q9Y587 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC15.03■□□□□ -0
AP4S1Q9Y587 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
AP4S1Q9Y587 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC15.03■□□□□ -0
AP4S1Q9Y587 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
AP4S1Q9Y587 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
AP4S1Q9Y587 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
AP4S1Q9Y587 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
AP4S1Q9Y587 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC15.03■□□□□ -0
AP4S1Q9Y587 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
AP4S1Q9Y587 NUS1P2-201ENST00000417358 873 ntBASIC15.03■□□□□ -0
AP4S1Q9Y587 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC15.03■□□□□ -0
AP4S1Q9Y587 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC15.03■□□□□ -0
AP4S1Q9Y587 AC132008.2-207ENST00000454517 770 ntBASIC15.03■□□□□ -0
AP4S1Q9Y587 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC15.03■□□□□ -0
AP4S1Q9Y587 AC106795.1-205ENST00000512851 1056 ntBASIC15.03■□□□□ -0
AP4S1Q9Y587 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC15.03■□□□□ -0
AP4S1Q9Y587 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC15.03■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms