Protein–RNA interactions for Protein: Q9Y548

YIPF1, Protein YIPF1, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF1Q9Y548 STX1A-203ENST00000395155 783 ntTSL 2 BASIC16.43■□□□□ 0.22
YIPF1Q9Y548 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
YIPF1Q9Y548 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC16.43■□□□□ 0.22
YIPF1Q9Y548 AC106760.1-201ENST00000508690 800 ntBASIC16.43■□□□□ 0.22
YIPF1Q9Y548 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC16.43■□□□□ 0.22
YIPF1Q9Y548 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC16.43■□□□□ 0.22
YIPF1Q9Y548 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC16.43■□□□□ 0.22
YIPF1Q9Y548 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
YIPF1Q9Y548 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC16.43■□□□□ 0.22
YIPF1Q9Y548 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC16.43■□□□□ 0.22
YIPF1Q9Y548 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC16.43■□□□□ 0.22
YIPF1Q9Y548 MIR6799-201ENST00000620297 69 ntBASIC16.43■□□□□ 0.22
YIPF1Q9Y548 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
YIPF1Q9Y548 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
YIPF1Q9Y548 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC16.43■□□□□ 0.22
YIPF1Q9Y548 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC16.43■□□□□ 0.22
YIPF1Q9Y548 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
YIPF1Q9Y548 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
YIPF1Q9Y548 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
YIPF1Q9Y548 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
YIPF1Q9Y548 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC16.43■□□□□ 0.22
YIPF1Q9Y548 AC093525.8-201ENST00000624099 1342 ntBASIC16.43■□□□□ 0.22
YIPF1Q9Y548 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
YIPF1Q9Y548 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
YIPF1Q9Y548 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
YIPF1Q9Y548 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC16.43■□□□□ 0.22
YIPF1Q9Y548 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC16.43■□□□□ 0.22
YIPF1Q9Y548 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
YIPF1Q9Y548 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC16.42■□□□□ 0.22
YIPF1Q9Y548 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
YIPF1Q9Y548 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
YIPF1Q9Y548 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC16.42■□□□□ 0.22
YIPF1Q9Y548 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
YIPF1Q9Y548 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
YIPF1Q9Y548 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
YIPF1Q9Y548 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC16.42■□□□□ 0.22
YIPF1Q9Y548 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
YIPF1Q9Y548 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
YIPF1Q9Y548 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC16.42■□□□□ 0.22
YIPF1Q9Y548 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
YIPF1Q9Y548 AC092933.1-201ENST00000393644 945 ntBASIC16.42■□□□□ 0.22
YIPF1Q9Y548 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
YIPF1Q9Y548 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC16.42■□□□□ 0.22
YIPF1Q9Y548 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC16.42■□□□□ 0.22
YIPF1Q9Y548 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC16.42■□□□□ 0.22
YIPF1Q9Y548 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
YIPF1Q9Y548 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC16.42■□□□□ 0.22
YIPF1Q9Y548 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC16.42■□□□□ 0.22
YIPF1Q9Y548 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC16.42■□□□□ 0.22
YIPF1Q9Y548 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC16.42■□□□□ 0.22
YIPF1Q9Y548 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC16.42■□□□□ 0.22
YIPF1Q9Y548 IFT20-206ENST00000578122 834 ntTSL 2 BASIC16.42■□□□□ 0.22
YIPF1Q9Y548 IFT20-208ENST00000578985 831 ntTSL 3 BASIC16.42■□□□□ 0.22
YIPF1Q9Y548 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC16.42■□□□□ 0.22
YIPF1Q9Y548 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
YIPF1Q9Y548 AC093813.1-201ENST00000605066 256 ntBASIC16.42■□□□□ 0.22
YIPF1Q9Y548 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
YIPF1Q9Y548 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
YIPF1Q9Y548 PRORSD1P-202ENST00000563365 2154 ntBASIC16.42■□□□□ 0.22
YIPF1Q9Y548 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
YIPF1Q9Y548 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
YIPF1Q9Y548 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
YIPF1Q9Y548 CROCCP1-201ENST00000426910 5675 ntBASIC16.42■□□□□ 0.22
YIPF1Q9Y548 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
YIPF1Q9Y548 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
YIPF1Q9Y548 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
YIPF1Q9Y548 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
YIPF1Q9Y548 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC16.42■□□□□ 0.22
YIPF1Q9Y548 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
YIPF1Q9Y548 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
YIPF1Q9Y548 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
YIPF1Q9Y548 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
YIPF1Q9Y548 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
YIPF1Q9Y548 AGER-206ENST00000375070 1463 ntTSL 5 BASIC16.42■□□□□ 0.22
YIPF1Q9Y548 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
YIPF1Q9Y548 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
YIPF1Q9Y548 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
YIPF1Q9Y548 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC16.41■□□□□ 0.22
YIPF1Q9Y548 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
YIPF1Q9Y548 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
YIPF1Q9Y548 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
YIPF1Q9Y548 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
YIPF1Q9Y548 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
YIPF1Q9Y548 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC16.41■□□□□ 0.22
YIPF1Q9Y548 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
YIPF1Q9Y548 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
YIPF1Q9Y548 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
YIPF1Q9Y548 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
YIPF1Q9Y548 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
YIPF1Q9Y548 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC16.41■□□□□ 0.22
YIPF1Q9Y548 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
YIPF1Q9Y548 BRF1-202ENST00000379932 884 ntTSL 5 BASIC16.41■□□□□ 0.22
YIPF1Q9Y548 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
YIPF1Q9Y548 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC16.41■□□□□ 0.22
YIPF1Q9Y548 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC16.41■□□□□ 0.22
YIPF1Q9Y548 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC16.41■□□□□ 0.22
YIPF1Q9Y548 FTH1P14-201ENST00000482930 551 ntBASIC16.41■□□□□ 0.22
YIPF1Q9Y548 LINC02447-202ENST00000501888 2146 ntBASIC16.41■□□□□ 0.22
YIPF1Q9Y548 UBL5-208ENST00000593087 320 ntTSL 3 BASIC16.41■□□□□ 0.22
YIPF1Q9Y548 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 82.2 ms