Protein–RNA interactions for Protein: Q9HCX3

ZNF304, Zinc finger protein 304, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF304Q9HCX3 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC15.1■□□□□ 0.01
ZNF304Q9HCX3 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
ZNF304Q9HCX3 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
ZNF304Q9HCX3 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC15.1■□□□□ 0.01
ZNF304Q9HCX3 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC15.1■□□□□ 0.01
ZNF304Q9HCX3 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
ZNF304Q9HCX3 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
ZNF304Q9HCX3 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC15.1■□□□□ 0.01
ZNF304Q9HCX3 LINC02228-204ENST00000642115 2962 ntBASIC15.1■□□□□ 0.01
ZNF304Q9HCX3 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
ZNF304Q9HCX3 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
ZNF304Q9HCX3 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
ZNF304Q9HCX3 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC15.1■□□□□ 0.01
ZNF304Q9HCX3 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
ZNF304Q9HCX3 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
ZNF304Q9HCX3 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
ZNF304Q9HCX3 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC15.1■□□□□ 0.01
ZNF304Q9HCX3 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
ZNF304Q9HCX3 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
ZNF304Q9HCX3 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC15.1■□□□□ 0.01
ZNF304Q9HCX3 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC15.1■□□□□ 0.01
ZNF304Q9HCX3 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC15.1■□□□□ 0.01
ZNF304Q9HCX3 TAF8-206ENST00000472818 719 ntTSL 2 BASIC15.1■□□□□ 0.01
ZNF304Q9HCX3 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC15.1■□□□□ 0.01
ZNF304Q9HCX3 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
ZNF304Q9HCX3 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC15.1■□□□□ 0.01
ZNF304Q9HCX3 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC15.1■□□□□ 0.01
ZNF304Q9HCX3 5S_rRNA.22-201ENST00000614916 106 ntBASIC15.1■□□□□ 0.01
ZNF304Q9HCX3 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
ZNF304Q9HCX3 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC15.1■□□□□ 0.01
ZNF304Q9HCX3 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
ZNF304Q9HCX3 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
ZNF304Q9HCX3 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
ZNF304Q9HCX3 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
ZNF304Q9HCX3 GCK-209ENST00000616242 2260 ntTSL 5 BASIC15.1■□□□□ 0.01
ZNF304Q9HCX3 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
ZNF304Q9HCX3 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
ZNF304Q9HCX3 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
ZNF304Q9HCX3 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC15.1■□□□□ 0.01
ZNF304Q9HCX3 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
ZNF304Q9HCX3 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
ZNF304Q9HCX3 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC15.1■□□□□ 0.01
ZNF304Q9HCX3 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
ZNF304Q9HCX3 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
ZNF304Q9HCX3 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
ZNF304Q9HCX3 AL596087.1-201ENST00000400979 1969 ntBASIC15.09■□□□□ 0.01
ZNF304Q9HCX3 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
ZNF304Q9HCX3 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
ZNF304Q9HCX3 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC15.09■□□□□ 0.01
ZNF304Q9HCX3 AC104581.4-201ENST00000623126 3052 ntBASIC15.09■□□□□ 0.01
ZNF304Q9HCX3 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
ZNF304Q9HCX3 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
ZNF304Q9HCX3 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC15.09■□□□□ 0.01
ZNF304Q9HCX3 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
ZNF304Q9HCX3 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
ZNF304Q9HCX3 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
ZNF304Q9HCX3 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
ZNF304Q9HCX3 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
ZNF304Q9HCX3 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
ZNF304Q9HCX3 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
ZNF304Q9HCX3 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
ZNF304Q9HCX3 AZGP1P1-201ENST00000411909 902 ntBASIC15.09■□□□□ 0.01
ZNF304Q9HCX3 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC15.09■□□□□ 0.01
ZNF304Q9HCX3 RASL12-203ENST00000434605 982 ntTSL 2 BASIC15.09■□□□□ 0.01
ZNF304Q9HCX3 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC15.09■□□□□ 0.01
ZNF304Q9HCX3 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC15.09■□□□□ 0.01
ZNF304Q9HCX3 DOC2GP-202ENST00000514950 1163 ntBASIC15.09■□□□□ 0.01
ZNF304Q9HCX3 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
ZNF304Q9HCX3 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC15.09■□□□□ 0.01
ZNF304Q9HCX3 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC15.09■□□□□ 0.01
ZNF304Q9HCX3 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
ZNF304Q9HCX3 AC104794.3-201ENST00000566840 1248 ntBASIC15.09■□□□□ 0.01
ZNF304Q9HCX3 AC025048.3-201ENST00000590609 569 ntBASIC15.09■□□□□ 0.01
ZNF304Q9HCX3 AC074044.1-201ENST00000609673 707 ntBASIC15.09■□□□□ 0.01
ZNF304Q9HCX3 AC005702.4-201ENST00000618393 416 ntBASIC15.09■□□□□ 0.01
ZNF304Q9HCX3 AC004461.2-201ENST00000629517 803 ntBASIC15.09■□□□□ 0.01
ZNF304Q9HCX3 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
ZNF304Q9HCX3 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
ZNF304Q9HCX3 MTHFR-217ENST00000641820 1569 ntBASIC15.09■□□□□ 0.01
ZNF304Q9HCX3 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
ZNF304Q9HCX3 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
ZNF304Q9HCX3 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
ZNF304Q9HCX3 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC15.09■□□□□ 0.01
ZNF304Q9HCX3 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
ZNF304Q9HCX3 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
ZNF304Q9HCX3 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
ZNF304Q9HCX3 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
ZNF304Q9HCX3 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0.01
ZNF304Q9HCX3 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC15.08■□□□□ 0.01
ZNF304Q9HCX3 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0.01
ZNF304Q9HCX3 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC15.08■□□□□ 0.01
ZNF304Q9HCX3 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0.01
ZNF304Q9HCX3 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0.01
ZNF304Q9HCX3 AC007541.1-201ENST00000570282 1469 ntBASIC15.08■□□□□ 0.01
ZNF304Q9HCX3 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC15.08■□□□□ 0.01
ZNF304Q9HCX3 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC15.08■□□□□ 0.01
ZNF304Q9HCX3 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC15.08■□□□□ 0.01
ZNF304Q9HCX3 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
ZNF304Q9HCX3 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
ZNF304Q9HCX3 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC15.08■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 94.3 ms