Protein–RNA interactions for Protein: Q9C035

TRIM5, Tripartite motif-containing protein 5, humanhuman

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM5Q9C035 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TRIM5Q9C035 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC17.76■□□□□ 0.43
TRIM5Q9C035 MROH4P-201ENST00000431302 1578 ntBASIC17.76■□□□□ 0.43
TRIM5Q9C035 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TRIM5Q9C035 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
TRIM5Q9C035 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRIM5Q9C035 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRIM5Q9C035 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRIM5Q9C035 AC073621.1-201ENST00000392730 636 ntBASIC17.76■□□□□ 0.43
TRIM5Q9C035 ATP5G2P1-201ENST00000433580 426 ntBASIC17.76■□□□□ 0.43
TRIM5Q9C035 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
TRIM5Q9C035 AC021087.4-201ENST00000563761 564 ntBASIC17.76■□□□□ 0.43
TRIM5Q9C035 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
TRIM5Q9C035 AC107918.4-202ENST00000641623 219 ntBASIC17.76■□□□□ 0.43
TRIM5Q9C035 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRIM5Q9C035 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
TRIM5Q9C035 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC17.76■□□□□ 0.43
TRIM5Q9C035 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRIM5Q9C035 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
TRIM5Q9C035 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRIM5Q9C035 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRIM5Q9C035 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC17.76■□□□□ 0.43
TRIM5Q9C035 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRIM5Q9C035 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
TRIM5Q9C035 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TRIM5Q9C035 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC17.76■□□□□ 0.43
TRIM5Q9C035 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRIM5Q9C035 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC17.76■□□□□ 0.43
TRIM5Q9C035 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRIM5Q9C035 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
TRIM5Q9C035 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRIM5Q9C035 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
TRIM5Q9C035 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
TRIM5Q9C035 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
TRIM5Q9C035 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRIM5Q9C035 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC17.75■□□□□ 0.43
TRIM5Q9C035 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRIM5Q9C035 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRIM5Q9C035 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
TRIM5Q9C035 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRIM5Q9C035 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC17.75■□□□□ 0.43
TRIM5Q9C035 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
TRIM5Q9C035 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC17.75■□□□□ 0.43
TRIM5Q9C035 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
TRIM5Q9C035 KRT18P27-201ENST00000427733 1299 ntBASIC17.75■□□□□ 0.43
TRIM5Q9C035 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRIM5Q9C035 AC136632.2-201ENST00000512891 861 ntBASIC17.75■□□□□ 0.43
TRIM5Q9C035 NME3-204ENST00000563498 920 ntTSL 2 BASIC17.75■□□□□ 0.43
TRIM5Q9C035 AL049597.2-201ENST00000565575 961 ntBASIC17.75■□□□□ 0.43
TRIM5Q9C035 PAM16-208ENST00000573553 722 ntTSL 2 BASIC17.75■□□□□ 0.43
TRIM5Q9C035 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRIM5Q9C035 MIR4321-201ENST00000592276 80 ntBASIC17.75■□□□□ 0.43
TRIM5Q9C035 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC17.75■□□□□ 0.43
TRIM5Q9C035 ACTL9-202ENST00000612068 1252 ntBASIC17.75■□□□□ 0.43
TRIM5Q9C035 AP000550.4-202ENST00000639755 178 ntBASIC17.75■□□□□ 0.43
TRIM5Q9C035 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRIM5Q9C035 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRIM5Q9C035 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRIM5Q9C035 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRIM5Q9C035 AC117489.1-201ENST00000625169 3217 ntBASIC17.75■□□□□ 0.43
TRIM5Q9C035 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
TRIM5Q9C035 AC018892.3-201ENST00000623986 2499 ntBASIC17.75■□□□□ 0.43
TRIM5Q9C035 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRIM5Q9C035 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
TRIM5Q9C035 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRIM5Q9C035 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRIM5Q9C035 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TRIM5Q9C035 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TRIM5Q9C035 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC17.74■□□□□ 0.43
TRIM5Q9C035 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC17.74■□□□□ 0.43
TRIM5Q9C035 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TRIM5Q9C035 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
TRIM5Q9C035 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TRIM5Q9C035 AC148477.4-201ENST00000613430 1793 ntBASIC17.74■□□□□ 0.43
TRIM5Q9C035 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC17.74■□□□□ 0.43
TRIM5Q9C035 AJ011931.1-201ENST00000618749 2492 ntBASIC17.74■□□□□ 0.43
TRIM5Q9C035 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TRIM5Q9C035 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TRIM5Q9C035 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
TRIM5Q9C035 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
TRIM5Q9C035 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
TRIM5Q9C035 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC17.74■□□□□ 0.43
TRIM5Q9C035 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC17.74■□□□□ 0.43
TRIM5Q9C035 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
TRIM5Q9C035 IGHV3-65-201ENST00000523210 341 ntBASIC17.74■□□□□ 0.43
TRIM5Q9C035 AC087388.1-201ENST00000571370 1112 ntBASIC17.74■□□□□ 0.43
TRIM5Q9C035 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC17.74■□□□□ 0.43
TRIM5Q9C035 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC17.74■□□□□ 0.43
TRIM5Q9C035 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC17.74■□□□□ 0.43
TRIM5Q9C035 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
TRIM5Q9C035 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC17.74■□□□□ 0.43
TRIM5Q9C035 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
TRIM5Q9C035 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TRIM5Q9C035 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TRIM5Q9C035 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
TRIM5Q9C035 AC127383.1-201ENST00000444697 1800 ntBASIC17.74■□□□□ 0.43
TRIM5Q9C035 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TRIM5Q9C035 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC17.74■□□□□ 0.43
TRIM5Q9C035 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC17.74■□□□□ 0.43
TRIM5Q9C035 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms