Protein–RNA interactions for Protein: Q99788

CMKLR1, Chemokine-like receptor 1, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMKLR1Q99788 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC15.15■□□□□ 0.02
CMKLR1Q99788 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CMKLR1Q99788 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
CMKLR1Q99788 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
CMKLR1Q99788 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CMKLR1Q99788 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
CMKLR1Q99788 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC15.14■□□□□ 0.01
CMKLR1Q99788 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
CMKLR1Q99788 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CMKLR1Q99788 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC15.14■□□□□ 0.01
CMKLR1Q99788 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CMKLR1Q99788 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC15.14■□□□□ 0.01
CMKLR1Q99788 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC15.14■□□□□ 0.01
CMKLR1Q99788 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CMKLR1Q99788 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CMKLR1Q99788 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CMKLR1Q99788 FLJ38576-201ENST00000623820 2459 ntBASIC15.14■□□□□ 0.01
CMKLR1Q99788 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC15.14■□□□□ 0.01
CMKLR1Q99788 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CMKLR1Q99788 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CMKLR1Q99788 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
CMKLR1Q99788 AC134915.1-201ENST00000426461 574 ntBASIC15.14■□□□□ 0.01
CMKLR1Q99788 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CMKLR1Q99788 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC15.14■□□□□ 0.01
CMKLR1Q99788 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC15.14■□□□□ 0.01
CMKLR1Q99788 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC15.14■□□□□ 0.01
CMKLR1Q99788 KLF2P4-201ENST00000451959 1225 ntBASIC15.14■□□□□ 0.01
CMKLR1Q99788 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC15.14■□□□□ 0.01
CMKLR1Q99788 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC15.14■□□□□ 0.01
CMKLR1Q99788 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC15.14■□□□□ 0.01
CMKLR1Q99788 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
CMKLR1Q99788 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC15.14■□□□□ 0.01
CMKLR1Q99788 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC15.14■□□□□ 0.01
CMKLR1Q99788 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC15.14■□□□□ 0.01
CMKLR1Q99788 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC15.14■□□□□ 0.01
CMKLR1Q99788 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC15.14■□□□□ 0.01
CMKLR1Q99788 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC15.14■□□□□ 0.01
CMKLR1Q99788 BRI3BPP1-201ENST00000594224 787 ntBASIC15.14■□□□□ 0.01
CMKLR1Q99788 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC15.14■□□□□ 0.01
CMKLR1Q99788 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC15.14■□□□□ 0.01
CMKLR1Q99788 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
CMKLR1Q99788 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC15.14■□□□□ 0.01
CMKLR1Q99788 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CMKLR1Q99788 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CMKLR1Q99788 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CMKLR1Q99788 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
CMKLR1Q99788 AC079328.2-201ENST00000561241 3354 ntBASIC15.14■□□□□ 0.01
CMKLR1Q99788 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CMKLR1Q99788 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC15.14■□□□□ 0.01
CMKLR1Q99788 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CMKLR1Q99788 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CMKLR1Q99788 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
CMKLR1Q99788 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CMKLR1Q99788 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC15.14■□□□□ 0.01
CMKLR1Q99788 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CMKLR1Q99788 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CMKLR1Q99788 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
CMKLR1Q99788 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
CMKLR1Q99788 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC15.13■□□□□ 0.01
CMKLR1Q99788 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CMKLR1Q99788 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CMKLR1Q99788 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CMKLR1Q99788 HNRNPA1P48-201ENST00000562726 1377 ntBASIC15.13■□□□□ 0.01
CMKLR1Q99788 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CMKLR1Q99788 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CMKLR1Q99788 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC15.13■□□□□ 0.01
CMKLR1Q99788 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC15.13■□□□□ 0.01
CMKLR1Q99788 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
CMKLR1Q99788 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC15.13■□□□□ 0.01
CMKLR1Q99788 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CMKLR1Q99788 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CMKLR1Q99788 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CMKLR1Q99788 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CMKLR1Q99788 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CMKLR1Q99788 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
CMKLR1Q99788 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
CMKLR1Q99788 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC15.13■□□□□ 0.01
CMKLR1Q99788 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CMKLR1Q99788 TOMM22P5-201ENST00000416399 439 ntBASIC15.13■□□□□ 0.01
CMKLR1Q99788 SOCS2P1-201ENST00000417727 557 ntBASIC15.13■□□□□ 0.01
CMKLR1Q99788 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC15.13■□□□□ 0.01
CMKLR1Q99788 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC15.13■□□□□ 0.01
CMKLR1Q99788 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC15.13■□□□□ 0.01
CMKLR1Q99788 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC15.13■□□□□ 0.01
CMKLR1Q99788 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC15.13■□□□□ 0.01
CMKLR1Q99788 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC15.13■□□□□ 0.01
CMKLR1Q99788 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
CMKLR1Q99788 PTP4A1P2-201ENST00000546033 454 ntBASIC15.13■□□□□ 0.01
CMKLR1Q99788 SNX29P1-201ENST00000548357 1007 ntBASIC15.13■□□□□ 0.01
CMKLR1Q99788 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CMKLR1Q99788 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC15.13■□□□□ 0.01
CMKLR1Q99788 AL359711.2-201ENST00000563105 872 ntBASIC15.13■□□□□ 0.01
CMKLR1Q99788 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC15.13■□□□□ 0.01
CMKLR1Q99788 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CMKLR1Q99788 MIR5189-201ENST00000577370 114 ntBASIC15.13■□□□□ 0.01
CMKLR1Q99788 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC15.13■□□□□ 0.01
CMKLR1Q99788 RPS24-214ENST00000613865 538 ntTSL 5 BASIC15.13■□□□□ 0.01
CMKLR1Q99788 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CMKLR1Q99788 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CMKLR1Q99788 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms