Protein–RNA interactions for Protein: Q96FC9

DDX11, ATP-dependent DNA helicase DDX11, humanhuman

Predictions only

Length 970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11Q96FC9 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC18.87■□□□□ 0.61
DDX11Q96FC9 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
DDX11Q96FC9 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
DDX11Q96FC9 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC18.87■□□□□ 0.61
DDX11Q96FC9 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
DDX11Q96FC9 AC134407.2-201ENST00000625089 1978 ntBASIC18.86■□□□□ 0.61
DDX11Q96FC9 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
DDX11Q96FC9 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC18.86■□□□□ 0.61
DDX11Q96FC9 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC18.86■□□□□ 0.61
DDX11Q96FC9 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
DDX11Q96FC9 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
DDX11Q96FC9 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC18.86■□□□□ 0.61
DDX11Q96FC9 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC18.86■□□□□ 0.61
DDX11Q96FC9 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
DDX11Q96FC9 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
DDX11Q96FC9 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
DDX11Q96FC9 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
DDX11Q96FC9 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
DDX11Q96FC9 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
DDX11Q96FC9 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
DDX11Q96FC9 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC18.86■□□□□ 0.61
DDX11Q96FC9 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC18.86■□□□□ 0.61
DDX11Q96FC9 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
DDX11Q96FC9 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
DDX11Q96FC9 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
DDX11Q96FC9 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
DDX11Q96FC9 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
DDX11Q96FC9 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
DDX11Q96FC9 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
DDX11Q96FC9 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
DDX11Q96FC9 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC18.86■□□□□ 0.61
DDX11Q96FC9 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC18.86■□□□□ 0.61
DDX11Q96FC9 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC18.86■□□□□ 0.61
DDX11Q96FC9 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
DDX11Q96FC9 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
DDX11Q96FC9 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
DDX11Q96FC9 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
DDX11Q96FC9 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
DDX11Q96FC9 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC18.85■□□□□ 0.61
DDX11Q96FC9 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC18.85■□□□□ 0.61
DDX11Q96FC9 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
DDX11Q96FC9 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
DDX11Q96FC9 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
DDX11Q96FC9 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
DDX11Q96FC9 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
DDX11Q96FC9 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
DDX11Q96FC9 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
DDX11Q96FC9 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
DDX11Q96FC9 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC18.85■□□□□ 0.61
DDX11Q96FC9 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
DDX11Q96FC9 CRB3P1-201ENST00000449338 276 ntBASIC18.85■□□□□ 0.61
DDX11Q96FC9 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
DDX11Q96FC9 RNA5SP410-201ENST00000516285 106 ntBASIC18.85■□□□□ 0.61
DDX11Q96FC9 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC18.85■□□□□ 0.61
DDX11Q96FC9 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC18.85■□□□□ 0.61
DDX11Q96FC9 LITAF-210ENST00000571976 548 ntTSL 2 BASIC18.85■□□□□ 0.61
DDX11Q96FC9 LITAF-214ENST00000574703 486 ntTSL 2 BASIC18.85■□□□□ 0.61
DDX11Q96FC9 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC18.85■□□□□ 0.61
DDX11Q96FC9 AC004233.3-201ENST00000607794 1269 ntBASIC18.85■□□□□ 0.61
DDX11Q96FC9 BANP-201ENST00000286122 2368 ntTSL 5 BASIC18.85■□□□□ 0.61
DDX11Q96FC9 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
DDX11Q96FC9 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC18.85■□□□□ 0.61
DDX11Q96FC9 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
DDX11Q96FC9 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
DDX11Q96FC9 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
DDX11Q96FC9 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
DDX11Q96FC9 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
DDX11Q96FC9 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
DDX11Q96FC9 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
DDX11Q96FC9 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
DDX11Q96FC9 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC18.84■□□□□ 0.61
DDX11Q96FC9 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
DDX11Q96FC9 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC18.84■□□□□ 0.61
DDX11Q96FC9 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
DDX11Q96FC9 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
DDX11Q96FC9 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
DDX11Q96FC9 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC18.84■□□□□ 0.61
DDX11Q96FC9 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
DDX11Q96FC9 PIN1P1-201ENST00000412108 996 ntBASIC18.84■□□□□ 0.61
DDX11Q96FC9 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC18.84■□□□□ 0.61
DDX11Q96FC9 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
DDX11Q96FC9 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC18.84■□□□□ 0.61
DDX11Q96FC9 MAX-210ENST00000555419 765 ntTSL 5 BASIC18.84■□□□□ 0.61
DDX11Q96FC9 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC18.84■□□□□ 0.61
DDX11Q96FC9 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC18.84■□□□□ 0.61
DDX11Q96FC9 RN7SL828P-201ENST00000607615 303 ntBASIC18.84■□□□□ 0.61
DDX11Q96FC9 AL589739.1-201ENST00000607720 493 ntBASIC18.84■□□□□ 0.61
DDX11Q96FC9 CECR7-204ENST00000609932 568 ntTSL 2 BASIC18.84■□□□□ 0.61
DDX11Q96FC9 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
DDX11Q96FC9 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
DDX11Q96FC9 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC18.84■□□□□ 0.61
DDX11Q96FC9 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
DDX11Q96FC9 CICP13-201ENST00000422015 2789 ntBASIC18.84■□□□□ 0.61
DDX11Q96FC9 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC18.84■□□□□ 0.61
DDX11Q96FC9 AL596257.1-201ENST00000641463 2694 ntBASIC18.84■□□□□ 0.61
DDX11Q96FC9 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
DDX11Q96FC9 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC18.84■□□□□ 0.61
DDX11Q96FC9 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC18.84■□□□□ 0.61
DDX11Q96FC9 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
DDX11Q96FC9 CETN4P-206ENST00000642099 2168 ntBASIC18.83■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 74.1 ms