Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
SLC44A1Q8WWI5 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
SLC44A1Q8WWI5 AL390755.1-201ENST00000623716 2027 ntBASIC15.92■□□□□ 0.14
SLC44A1Q8WWI5 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SLC44A1Q8WWI5 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SLC44A1Q8WWI5 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC15.92■□□□□ 0.14
SLC44A1Q8WWI5 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
SLC44A1Q8WWI5 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC15.92■□□□□ 0.14
SLC44A1Q8WWI5 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SLC44A1Q8WWI5 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC15.92■□□□□ 0.14
SLC44A1Q8WWI5 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SLC44A1Q8WWI5 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
SLC44A1Q8WWI5 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
SLC44A1Q8WWI5 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SLC44A1Q8WWI5 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SLC44A1Q8WWI5 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
SLC44A1Q8WWI5 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
SLC44A1Q8WWI5 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
SLC44A1Q8WWI5 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
SLC44A1Q8WWI5 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
SLC44A1Q8WWI5 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
SLC44A1Q8WWI5 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
SLC44A1Q8WWI5 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC15.91■□□□□ 0.14
SLC44A1Q8WWI5 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SLC44A1Q8WWI5 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
SLC44A1Q8WWI5 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC15.91■□□□□ 0.14
SLC44A1Q8WWI5 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SLC44A1Q8WWI5 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SLC44A1Q8WWI5 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SLC44A1Q8WWI5 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC15.91■□□□□ 0.14
SLC44A1Q8WWI5 AC142381.1-201ENST00000426099 345 ntBASIC15.91■□□□□ 0.14
SLC44A1Q8WWI5 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SLC44A1Q8WWI5 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC15.91■□□□□ 0.14
SLC44A1Q8WWI5 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
SLC44A1Q8WWI5 PHKG1P2-201ENST00000457537 863 ntBASIC15.91■□□□□ 0.14
SLC44A1Q8WWI5 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC15.91■□□□□ 0.14
SLC44A1Q8WWI5 CCDC74BP1-201ENST00000508880 1123 ntBASIC15.91■□□□□ 0.14
SLC44A1Q8WWI5 AC112191.1-201ENST00000523689 701 ntBASIC15.91■□□□□ 0.14
SLC44A1Q8WWI5 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC15.91■□□□□ 0.14
SLC44A1Q8WWI5 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC15.91■□□□□ 0.14
SLC44A1Q8WWI5 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC15.91■□□□□ 0.14
SLC44A1Q8WWI5 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
SLC44A1Q8WWI5 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SLC44A1Q8WWI5 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SLC44A1Q8WWI5 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SLC44A1Q8WWI5 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SLC44A1Q8WWI5 KRT8P37-201ENST00000451609 1420 ntBASIC15.91■□□□□ 0.14
SLC44A1Q8WWI5 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SLC44A1Q8WWI5 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
SLC44A1Q8WWI5 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
SLC44A1Q8WWI5 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC15.91■□□□□ 0.14
SLC44A1Q8WWI5 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
SLC44A1Q8WWI5 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
SLC44A1Q8WWI5 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SLC44A1Q8WWI5 AKAP8P1-201ENST00000434743 1349 ntBASIC15.91■□□□□ 0.14
SLC44A1Q8WWI5 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
SLC44A1Q8WWI5 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
SLC44A1Q8WWI5 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SLC44A1Q8WWI5 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SLC44A1Q8WWI5 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC15.91■□□□□ 0.14
SLC44A1Q8WWI5 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
SLC44A1Q8WWI5 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SLC44A1Q8WWI5 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SLC44A1Q8WWI5 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC15.9■□□□□ 0.14
SLC44A1Q8WWI5 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SLC44A1Q8WWI5 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
SLC44A1Q8WWI5 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC15.9■□□□□ 0.14
SLC44A1Q8WWI5 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
SLC44A1Q8WWI5 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC15.9■□□□□ 0.14
SLC44A1Q8WWI5 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SLC44A1Q8WWI5 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC15.9■□□□□ 0.14
SLC44A1Q8WWI5 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC15.9■□□□□ 0.14
SLC44A1Q8WWI5 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SLC44A1Q8WWI5 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC15.9■□□□□ 0.14
SLC44A1Q8WWI5 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
SLC44A1Q8WWI5 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SLC44A1Q8WWI5 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC15.9■□□□□ 0.14
SLC44A1Q8WWI5 FAM220BP-201ENST00000377689 816 ntBASIC15.9■□□□□ 0.14
SLC44A1Q8WWI5 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC15.9■□□□□ 0.14
SLC44A1Q8WWI5 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC15.9■□□□□ 0.14
SLC44A1Q8WWI5 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC15.9■□□□□ 0.14
SLC44A1Q8WWI5 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC15.9■□□□□ 0.14
SLC44A1Q8WWI5 INO80E-210ENST00000567705 880 ntTSL 3 BASIC15.9■□□□□ 0.14
SLC44A1Q8WWI5 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC15.9■□□□□ 0.14
SLC44A1Q8WWI5 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
SLC44A1Q8WWI5 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC15.9■□□□□ 0.14
SLC44A1Q8WWI5 AC008267.7-201ENST00000624570 1194 ntBASIC15.9■□□□□ 0.14
SLC44A1Q8WWI5 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC15.9■□□□□ 0.14
SLC44A1Q8WWI5 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
SLC44A1Q8WWI5 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SLC44A1Q8WWI5 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC15.9■□□□□ 0.14
SLC44A1Q8WWI5 AC104109.2-201ENST00000602919 1418 ntBASIC15.9■□□□□ 0.14
SLC44A1Q8WWI5 CYP4F24P-201ENST00000586049 1580 ntBASIC15.9■□□□□ 0.14
SLC44A1Q8WWI5 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SLC44A1Q8WWI5 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SLC44A1Q8WWI5 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
SLC44A1Q8WWI5 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SLC44A1Q8WWI5 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
SLC44A1Q8WWI5 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SLC44A1Q8WWI5 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 78.9 ms