Protein–RNA interactions for Protein: Q8TCY0

SMIM11B, Small integral membrane protein 11B, humanhuman

Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11BQ8TCY0 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC10.35□□□□□ -0.75
SMIM11BQ8TCY0 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC10.35□□□□□ -0.75
SMIM11BQ8TCY0 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC10.35□□□□□ -0.75
SMIM11BQ8TCY0 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
SMIM11BQ8TCY0 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
SMIM11BQ8TCY0 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
SMIM11BQ8TCY0 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC10.35□□□□□ -0.75
SMIM11BQ8TCY0 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
SMIM11BQ8TCY0 OPA1-202ENST00000361510 6492 ntAPPRIS ALT2 TSL 5 BASIC10.35□□□□□ -0.75
SMIM11BQ8TCY0 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC10.35□□□□□ -0.75
SMIM11BQ8TCY0 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
SMIM11BQ8TCY0 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
SMIM11BQ8TCY0 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
SMIM11BQ8TCY0 PTPN23-201ENST00000265562 5244 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
SMIM11BQ8TCY0 SLC9A3P2-201ENST00000447821 2021 ntBASIC10.35□□□□□ -0.75
SMIM11BQ8TCY0 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC10.35□□□□□ -0.75
SMIM11BQ8TCY0 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
SMIM11BQ8TCY0 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC10.35□□□□□ -0.75
SMIM11BQ8TCY0 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
SMIM11BQ8TCY0 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
SMIM11BQ8TCY0 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
SMIM11BQ8TCY0 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
SMIM11BQ8TCY0 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
SMIM11BQ8TCY0 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
SMIM11BQ8TCY0 KRT18P38-201ENST00000449496 1282 ntBASIC10.35□□□□□ -0.75
SMIM11BQ8TCY0 TSPY15P-201ENST00000457163 923 ntBASIC10.35□□□□□ -0.75
SMIM11BQ8TCY0 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC10.35□□□□□ -0.75
SMIM11BQ8TCY0 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC10.35□□□□□ -0.75
SMIM11BQ8TCY0 EHF-205ENST00000527935 557 ntTSL 2 BASIC10.35□□□□□ -0.75
SMIM11BQ8TCY0 ABR-204ENST00000543210 1049 ntTSL 2 BASIC10.35□□□□□ -0.75
SMIM11BQ8TCY0 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC10.35□□□□□ -0.75
SMIM11BQ8TCY0 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC10.35□□□□□ -0.75
SMIM11BQ8TCY0 ABR-217ENST00000572441 563 ntTSL 4 BASIC10.35□□□□□ -0.75
SMIM11BQ8TCY0 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC10.35□□□□□ -0.75
SMIM11BQ8TCY0 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC10.35□□□□□ -0.75
SMIM11BQ8TCY0 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC10.35□□□□□ -0.75
SMIM11BQ8TCY0 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC10.35□□□□□ -0.75
SMIM11BQ8TCY0 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC10.35□□□□□ -0.75
SMIM11BQ8TCY0 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
SMIM11BQ8TCY0 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC10.35□□□□□ -0.75
SMIM11BQ8TCY0 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC10.35□□□□□ -0.75
SMIM11BQ8TCY0 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
SMIM11BQ8TCY0 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
SMIM11BQ8TCY0 PDE4D-203ENST00000340635 8232 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
SMIM11BQ8TCY0 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC10.35□□□□□ -0.75
SMIM11BQ8TCY0 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
SMIM11BQ8TCY0 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC10.35□□□□□ -0.75
SMIM11BQ8TCY0 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC10.35□□□□□ -0.75
SMIM11BQ8TCY0 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
SMIM11BQ8TCY0 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
SMIM11BQ8TCY0 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
SMIM11BQ8TCY0 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
SMIM11BQ8TCY0 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC10.35□□□□□ -0.75
SMIM11BQ8TCY0 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC10.35□□□□□ -0.75
SMIM11BQ8TCY0 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
SMIM11BQ8TCY0 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
SMIM11BQ8TCY0 MYLK-208ENST00000475616 5745 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
SMIM11BQ8TCY0 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
SMIM11BQ8TCY0 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC10.35□□□□□ -0.75
SMIM11BQ8TCY0 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC10.35□□□□□ -0.75
SMIM11BQ8TCY0 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
SMIM11BQ8TCY0 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
SMIM11BQ8TCY0 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
SMIM11BQ8TCY0 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
SMIM11BQ8TCY0 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
SMIM11BQ8TCY0 ZBED1P1-201ENST00000502364 1930 ntBASIC10.35□□□□□ -0.75
SMIM11BQ8TCY0 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC10.35□□□□□ -0.75
SMIM11BQ8TCY0 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
SMIM11BQ8TCY0 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC10.34□□□□□ -0.75
SMIM11BQ8TCY0 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC10.34□□□□□ -0.75
SMIM11BQ8TCY0 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
SMIM11BQ8TCY0 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
SMIM11BQ8TCY0 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC10.34□□□□□ -0.75
SMIM11BQ8TCY0 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
SMIM11BQ8TCY0 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC10.34□□□□□ -0.75
SMIM11BQ8TCY0 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC10.34□□□□□ -0.75
SMIM11BQ8TCY0 INPPL1-213ENST00000541756 4649 ntTSL 5 BASIC10.34□□□□□ -0.75
SMIM11BQ8TCY0 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
SMIM11BQ8TCY0 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC10.34□□□□□ -0.75
SMIM11BQ8TCY0 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC10.34□□□□□ -0.75
SMIM11BQ8TCY0 ELK4-202ENST00000357992 10239 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
SMIM11BQ8TCY0 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC10.34□□□□□ -0.75
SMIM11BQ8TCY0 KIF21B-201ENST00000332129 9897 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
SMIM11BQ8TCY0 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
SMIM11BQ8TCY0 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC10.34□□□□□ -0.75
SMIM11BQ8TCY0 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
SMIM11BQ8TCY0 PCM1-202ENST00000327578 8287 ntTSL 5 BASIC10.34□□□□□ -0.75
SMIM11BQ8TCY0 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC10.34□□□□□ -0.75
SMIM11BQ8TCY0 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
SMIM11BQ8TCY0 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
SMIM11BQ8TCY0 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC10.34□□□□□ -0.75
SMIM11BQ8TCY0 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
SMIM11BQ8TCY0 SLC4A7-213ENST00000454389 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
SMIM11BQ8TCY0 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC10.34□□□□□ -0.75
SMIM11BQ8TCY0 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
SMIM11BQ8TCY0 ITGAM-202ENST00000544665 4718 ntAPPRIS ALT1 TSL 1 (best) BASIC10.34□□□□□ -0.75
SMIM11BQ8TCY0 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC10.34□□□□□ -0.75
SMIM11BQ8TCY0 MYOM3-202ENST00000374434 5804 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
SMIM11BQ8TCY0 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC10.34□□□□□ -0.75
SMIM11BQ8TCY0 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Retrieved 100 of 98,524 protein–RNA pairs in 55.7 ms