Protein–RNA interactions for Protein: Q8NHS1

CLDND2, Claudin domain-containing protein 2, humanhuman

Predictions only

Length 167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND2Q8NHS1 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CLDND2Q8NHS1 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
CLDND2Q8NHS1 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
CLDND2Q8NHS1 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
CLDND2Q8NHS1 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC13.55□□□□□ -0.24
CLDND2Q8NHS1 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC13.55□□□□□ -0.24
CLDND2Q8NHS1 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CLDND2Q8NHS1 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC13.54□□□□□ -0.24
CLDND2Q8NHS1 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CLDND2Q8NHS1 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC13.54□□□□□ -0.24
CLDND2Q8NHS1 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CLDND2Q8NHS1 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
CLDND2Q8NHS1 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CLDND2Q8NHS1 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
CLDND2Q8NHS1 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
CLDND2Q8NHS1 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC13.54□□□□□ -0.24
CLDND2Q8NHS1 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CLDND2Q8NHS1 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CLDND2Q8NHS1 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CLDND2Q8NHS1 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
CLDND2Q8NHS1 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC13.54□□□□□ -0.24
CLDND2Q8NHS1 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC13.54□□□□□ -0.24
CLDND2Q8NHS1 WBP2-203ENST00000433525 928 ntTSL 2 BASIC13.54□□□□□ -0.24
CLDND2Q8NHS1 SPTLC1P1-201ENST00000447199 261 ntBASIC13.54□□□□□ -0.24
CLDND2Q8NHS1 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC13.54□□□□□ -0.24
CLDND2Q8NHS1 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC13.54□□□□□ -0.24
CLDND2Q8NHS1 PRR29-204ENST00000577953 565 ntTSL 4 BASIC13.54□□□□□ -0.24
CLDND2Q8NHS1 AC027307.3-201ENST00000594262 1100 ntBASIC13.54□□□□□ -0.24
CLDND2Q8NHS1 CECR7-204ENST00000609932 568 ntTSL 2 BASIC13.54□□□□□ -0.24
CLDND2Q8NHS1 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
CLDND2Q8NHS1 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC13.54□□□□□ -0.24
CLDND2Q8NHS1 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC13.54□□□□□ -0.24
CLDND2Q8NHS1 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CLDND2Q8NHS1 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CLDND2Q8NHS1 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CLDND2Q8NHS1 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
CLDND2Q8NHS1 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
CLDND2Q8NHS1 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC13.54□□□□□ -0.24
CLDND2Q8NHS1 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC13.54□□□□□ -0.24
CLDND2Q8NHS1 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
CLDND2Q8NHS1 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CLDND2Q8NHS1 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
CLDND2Q8NHS1 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC13.53□□□□□ -0.24
CLDND2Q8NHS1 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CLDND2Q8NHS1 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC13.53□□□□□ -0.24
CLDND2Q8NHS1 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
CLDND2Q8NHS1 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC13.53□□□□□ -0.24
CLDND2Q8NHS1 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC13.53□□□□□ -0.24
CLDND2Q8NHS1 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC13.53□□□□□ -0.24
CLDND2Q8NHS1 AC022532.1-201ENST00000624563 1728 ntBASIC13.53□□□□□ -0.24
CLDND2Q8NHS1 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
CLDND2Q8NHS1 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC13.53□□□□□ -0.24
CLDND2Q8NHS1 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
CLDND2Q8NHS1 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
CLDND2Q8NHS1 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC13.53□□□□□ -0.24
CLDND2Q8NHS1 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CLDND2Q8NHS1 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CLDND2Q8NHS1 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
CLDND2Q8NHS1 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
CLDND2Q8NHS1 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC13.53□□□□□ -0.24
CLDND2Q8NHS1 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
CLDND2Q8NHS1 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CLDND2Q8NHS1 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CLDND2Q8NHS1 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CLDND2Q8NHS1 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
CLDND2Q8NHS1 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CLDND2Q8NHS1 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CLDND2Q8NHS1 GSAP-205ENST00000430584 600 ntTSL 5 BASIC13.53□□□□□ -0.24
CLDND2Q8NHS1 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC13.53□□□□□ -0.24
CLDND2Q8NHS1 RN7SL618P-201ENST00000477850 296 ntBASIC13.53□□□□□ -0.24
CLDND2Q8NHS1 AP005018.1-201ENST00000525475 301 ntBASIC13.53□□□□□ -0.24
CLDND2Q8NHS1 SSH2-210ENST00000582084 560 ntTSL 3 BASIC13.53□□□□□ -0.24
CLDND2Q8NHS1 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
CLDND2Q8NHS1 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
CLDND2Q8NHS1 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CLDND2Q8NHS1 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC13.53□□□□□ -0.24
CLDND2Q8NHS1 AC063926.2-201ENST00000623766 1308 ntBASIC13.53□□□□□ -0.24
CLDND2Q8NHS1 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
CLDND2Q8NHS1 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CLDND2Q8NHS1 GCK-202ENST00000345378 2421 ntTSL 2 BASIC13.53□□□□□ -0.24
CLDND2Q8NHS1 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC13.53□□□□□ -0.24
CLDND2Q8NHS1 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CLDND2Q8NHS1 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CLDND2Q8NHS1 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
CLDND2Q8NHS1 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC13.53□□□□□ -0.24
CLDND2Q8NHS1 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC13.53□□□□□ -0.24
CLDND2Q8NHS1 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CLDND2Q8NHS1 AC006058.4-201ENST00000624016 1670 ntBASIC13.53□□□□□ -0.24
CLDND2Q8NHS1 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC13.53□□□□□ -0.24
CLDND2Q8NHS1 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC13.53□□□□□ -0.24
CLDND2Q8NHS1 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
CLDND2Q8NHS1 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CLDND2Q8NHS1 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CLDND2Q8NHS1 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
CLDND2Q8NHS1 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
CLDND2Q8NHS1 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
CLDND2Q8NHS1 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
CLDND2Q8NHS1 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC13.52□□□□□ -0.24
CLDND2Q8NHS1 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
CLDND2Q8NHS1 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms