Protein–RNA interactions for Protein: Q8IVE0

CROCCP3, Putative ciliary rootlet coiled-coil protein-like 2 protein, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3Q8IVE0 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC14.45□□□□□ -0.1
CROCCP3Q8IVE0 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC14.45□□□□□ -0.1
CROCCP3Q8IVE0 AC008550.1-201ENST00000511500 884 ntBASIC14.45□□□□□ -0.1
CROCCP3Q8IVE0 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC14.45□□□□□ -0.1
CROCCP3Q8IVE0 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC14.45□□□□□ -0.1
CROCCP3Q8IVE0 RNF126P1-202ENST00000569893 925 ntBASIC14.45□□□□□ -0.1
CROCCP3Q8IVE0 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
CROCCP3Q8IVE0 AC011467.2-201ENST00000598425 242 ntBASIC14.45□□□□□ -0.1
CROCCP3Q8IVE0 AC010654.1-201ENST00000615722 808 ntBASIC14.45□□□□□ -0.1
CROCCP3Q8IVE0 WDR6-223ENST00000627177 207 ntTSL 2 BASIC14.45□□□□□ -0.1
CROCCP3Q8IVE0 CDHR5-203ENST00000397542 3489 ntAPPRIS P4 TSL 1 (best) BASIC14.45□□□□□ -0.1
CROCCP3Q8IVE0 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CROCCP3Q8IVE0 PTPN23-201ENST00000265562 5244 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CROCCP3Q8IVE0 APLP2-203ENST00000338167 3270 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
CROCCP3Q8IVE0 FUBP1-203ENST00000370768 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CROCCP3Q8IVE0 ZNF202-206ENST00000529691 3384 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
CROCCP3Q8IVE0 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CROCCP3Q8IVE0 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CROCCP3Q8IVE0 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
CROCCP3Q8IVE0 YTHDF3-205ENST00000539294 5163 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
CROCCP3Q8IVE0 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CROCCP3Q8IVE0 DENND3-202ENST00000424248 4740 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CROCCP3Q8IVE0 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CROCCP3Q8IVE0 LDB3-209ENST00000623056 2314 ntTSL 5 BASIC14.44□□□□□ -0.1
CROCCP3Q8IVE0 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
CROCCP3Q8IVE0 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CROCCP3Q8IVE0 PC-214ENST00000628663 1470 ntTSL 5 BASIC14.44□□□□□ -0.1
CROCCP3Q8IVE0 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC14.44□□□□□ -0.1
CROCCP3Q8IVE0 TNFRSF11A-205ENST00000616710 3809 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
CROCCP3Q8IVE0 AC090826.2-201ENST00000568496 4946 ntTSL 2 BASIC14.44□□□□□ -0.1
CROCCP3Q8IVE0 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CROCCP3Q8IVE0 TMCC2-201ENST00000329800 2818 ntTSL 2 BASIC14.44□□□□□ -0.1
CROCCP3Q8IVE0 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC14.44□□□□□ -0.1
CROCCP3Q8IVE0 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CROCCP3Q8IVE0 SFXN3-201ENST00000224807 3089 ntTSL 5 BASIC14.44□□□□□ -0.1
CROCCP3Q8IVE0 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CROCCP3Q8IVE0 POFUT1-202ENST00000375749 5235 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CROCCP3Q8IVE0 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
CROCCP3Q8IVE0 FAM13B-201ENST00000033079 5465 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
CROCCP3Q8IVE0 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CROCCP3Q8IVE0 PRKY-203ENST00000528056 7218 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CROCCP3Q8IVE0 RBFADN-204ENST00000568911 5187 ntTSL 2 BASIC14.44□□□□□ -0.1
CROCCP3Q8IVE0 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC14.44□□□□□ -0.1
CROCCP3Q8IVE0 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC14.44□□□□□ -0.1
CROCCP3Q8IVE0 SNX5-210ENST00000481323 562 ntTSL 3 BASIC14.44□□□□□ -0.1
CROCCP3Q8IVE0 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC14.44□□□□□ -0.1
CROCCP3Q8IVE0 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC14.44□□□□□ -0.1
CROCCP3Q8IVE0 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC14.44□□□□□ -0.1
CROCCP3Q8IVE0 AL592071.1-201ENST00000611956 408 ntBASIC14.44□□□□□ -0.1
CROCCP3Q8IVE0 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC14.44□□□□□ -0.1
CROCCP3Q8IVE0 AC124864.1-201ENST00000623408 392 ntBASIC14.44□□□□□ -0.1
CROCCP3Q8IVE0 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CROCCP3Q8IVE0 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC14.44□□□□□ -0.1
CROCCP3Q8IVE0 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC14.44□□□□□ -0.1
CROCCP3Q8IVE0 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
CROCCP3Q8IVE0 MICB-202ENST00000399150 2346 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CROCCP3Q8IVE0 FAM30A-205ENST00000630242 9612 ntTSL 2 BASIC14.44□□□□□ -0.1
CROCCP3Q8IVE0 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
CROCCP3Q8IVE0 CSPG4-201ENST00000308508 8290 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CROCCP3Q8IVE0 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
CROCCP3Q8IVE0 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC14.44□□□□□ -0.1
CROCCP3Q8IVE0 NRIP3-201ENST00000309166 3809 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CROCCP3Q8IVE0 ABCA2-201ENST00000265662 8154 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
CROCCP3Q8IVE0 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
CROCCP3Q8IVE0 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC14.44□□□□□ -0.1
CROCCP3Q8IVE0 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC14.44□□□□□ -0.1
CROCCP3Q8IVE0 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CROCCP3Q8IVE0 SLC22A23-202ENST00000380302 2883 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CROCCP3Q8IVE0 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
CROCCP3Q8IVE0 AL731571.1-201ENST00000617058 5428 ntBASIC14.44□□□□□ -0.1
CROCCP3Q8IVE0 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CROCCP3Q8IVE0 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
CROCCP3Q8IVE0 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC14.43□□□□□ -0.1
CROCCP3Q8IVE0 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CROCCP3Q8IVE0 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CROCCP3Q8IVE0 Z82170.1-201ENST00000625081 3192 ntBASIC14.43□□□□□ -0.1
CROCCP3Q8IVE0 SEPT6-201ENST00000343984 2693 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CROCCP3Q8IVE0 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
CROCCP3Q8IVE0 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CROCCP3Q8IVE0 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CROCCP3Q8IVE0 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CROCCP3Q8IVE0 SH3BP5L-201ENST00000366472 3861 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CROCCP3Q8IVE0 EHD1-202ENST00000359393 3618 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
CROCCP3Q8IVE0 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
CROCCP3Q8IVE0 UBA5-202ENST00000356232 3705 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CROCCP3Q8IVE0 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC14.43□□□□□ -0.1
CROCCP3Q8IVE0 ZW10-201ENST00000200135 2992 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CROCCP3Q8IVE0 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CROCCP3Q8IVE0 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC14.43□□□□□ -0.1
CROCCP3Q8IVE0 LIN28AP1-201ENST00000429574 405 ntBASIC14.43□□□□□ -0.1
CROCCP3Q8IVE0 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC14.43□□□□□ -0.1
CROCCP3Q8IVE0 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC14.43□□□□□ -0.1
CROCCP3Q8IVE0 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
CROCCP3Q8IVE0 AC090616.6-201ENST00000582640 721 ntBASIC14.43□□□□□ -0.1
CROCCP3Q8IVE0 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC14.43□□□□□ -0.1
CROCCP3Q8IVE0 HNRNPUL1-204ENST00000392006 3555 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
CROCCP3Q8IVE0 FGR-204ENST00000399173 2483 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
CROCCP3Q8IVE0 CSPG4P12-202ENST00000559989 7790 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CROCCP3Q8IVE0 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CROCCP3Q8IVE0 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC14.43□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 2352 ms