Protein–RNA interactions for Protein: Q7LBR1

CHMP1B, Charged multivesicular body protein 1b, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1BQ7LBR1 SLBP-205ENST00000488267 987 ntTSL 2 BASIC14.74□□□□□ -0.05
CHMP1BQ7LBR1 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC14.74□□□□□ -0.05
CHMP1BQ7LBR1 AL512356.2-201ENST00000546955 174 ntBASIC14.74□□□□□ -0.05
CHMP1BQ7LBR1 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC14.74□□□□□ -0.05
CHMP1BQ7LBR1 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC14.74□□□□□ -0.05
CHMP1BQ7LBR1 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC14.74□□□□□ -0.05
CHMP1BQ7LBR1 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC14.74□□□□□ -0.05
CHMP1BQ7LBR1 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC14.74□□□□□ -0.05
CHMP1BQ7LBR1 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CHMP1BQ7LBR1 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CHMP1BQ7LBR1 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
CHMP1BQ7LBR1 AC003101.2-201ENST00000612557 442 ntBASIC14.74□□□□□ -0.05
CHMP1BQ7LBR1 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC14.74□□□□□ -0.05
CHMP1BQ7LBR1 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC14.74□□□□□ -0.05
CHMP1BQ7LBR1 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CHMP1BQ7LBR1 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC14.74□□□□□ -0.05
CHMP1BQ7LBR1 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC14.74□□□□□ -0.05
CHMP1BQ7LBR1 KIAA1217-203ENST00000376452 6052 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
CHMP1BQ7LBR1 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
CHMP1BQ7LBR1 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CHMP1BQ7LBR1 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
CHMP1BQ7LBR1 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
CHMP1BQ7LBR1 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CHMP1BQ7LBR1 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CHMP1BQ7LBR1 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CHMP1BQ7LBR1 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CHMP1BQ7LBR1 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CHMP1BQ7LBR1 LINC01144-201ENST00000626198 1710 ntBASIC14.74□□□□□ -0.05
CHMP1BQ7LBR1 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CHMP1BQ7LBR1 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CHMP1BQ7LBR1 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CHMP1BQ7LBR1 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
CHMP1BQ7LBR1 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
CHMP1BQ7LBR1 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CHMP1BQ7LBR1 TCAF2P1-201ENST00000291129 2421 ntBASIC14.74□□□□□ -0.05
CHMP1BQ7LBR1 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC14.74□□□□□ -0.05
CHMP1BQ7LBR1 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CHMP1BQ7LBR1 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CHMP1BQ7LBR1 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CHMP1BQ7LBR1 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CHMP1BQ7LBR1 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CHMP1BQ7LBR1 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CHMP1BQ7LBR1 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CHMP1BQ7LBR1 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
CHMP1BQ7LBR1 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
CHMP1BQ7LBR1 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CHMP1BQ7LBR1 CRYBG1-204ENST00000633556 9909 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
CHMP1BQ7LBR1 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC14.73□□□□□ -0.05
CHMP1BQ7LBR1 CFAP46-202ENST00000368586 8278 ntAPPRIS P2 TSL 5 BASIC14.73□□□□□ -0.05
CHMP1BQ7LBR1 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
CHMP1BQ7LBR1 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
CHMP1BQ7LBR1 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CHMP1BQ7LBR1 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC14.73□□□□□ -0.05
CHMP1BQ7LBR1 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
CHMP1BQ7LBR1 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
CHMP1BQ7LBR1 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC14.73□□□□□ -0.05
CHMP1BQ7LBR1 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CHMP1BQ7LBR1 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
CHMP1BQ7LBR1 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CHMP1BQ7LBR1 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CHMP1BQ7LBR1 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC14.73□□□□□ -0.05
CHMP1BQ7LBR1 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC14.73□□□□□ -0.05
CHMP1BQ7LBR1 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC14.73□□□□□ -0.05
CHMP1BQ7LBR1 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC14.73□□□□□ -0.05
CHMP1BQ7LBR1 AC125807.1-201ENST00000483097 614 ntBASIC14.73□□□□□ -0.05
CHMP1BQ7LBR1 RNA5SP410-201ENST00000516285 106 ntBASIC14.73□□□□□ -0.05
CHMP1BQ7LBR1 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC14.73□□□□□ -0.05
CHMP1BQ7LBR1 SSH2-211ENST00000590153 570 ntTSL 4 BASIC14.73□□□□□ -0.05
CHMP1BQ7LBR1 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC14.73□□□□□ -0.05
CHMP1BQ7LBR1 AL355385.1-201ENST00000606123 409 ntBASIC14.73□□□□□ -0.05
CHMP1BQ7LBR1 AC093512.1-201ENST00000617969 520 ntBASIC14.73□□□□□ -0.05
CHMP1BQ7LBR1 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC14.73□□□□□ -0.05
CHMP1BQ7LBR1 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CHMP1BQ7LBR1 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CHMP1BQ7LBR1 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
CHMP1BQ7LBR1 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CHMP1BQ7LBR1 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CHMP1BQ7LBR1 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CHMP1BQ7LBR1 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
CHMP1BQ7LBR1 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC14.73□□□□□ -0.05
CHMP1BQ7LBR1 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC14.73□□□□□ -0.05
CHMP1BQ7LBR1 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CHMP1BQ7LBR1 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CHMP1BQ7LBR1 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC14.73□□□□□ -0.05
CHMP1BQ7LBR1 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CHMP1BQ7LBR1 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
CHMP1BQ7LBR1 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC14.72□□□□□ -0.05
CHMP1BQ7LBR1 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CHMP1BQ7LBR1 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CHMP1BQ7LBR1 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CHMP1BQ7LBR1 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CHMP1BQ7LBR1 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC14.72□□□□□ -0.05
CHMP1BQ7LBR1 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CHMP1BQ7LBR1 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC14.72□□□□□ -0.05
CHMP1BQ7LBR1 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC14.72□□□□□ -0.05
CHMP1BQ7LBR1 GCK-202ENST00000345378 2421 ntTSL 2 BASIC14.72□□□□□ -0.05
CHMP1BQ7LBR1 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CHMP1BQ7LBR1 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CHMP1BQ7LBR1 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CHMP1BQ7LBR1 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms