Protein–RNA interactions for Protein: P57739

CLDN2, Claudin-2, humanhuman

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN2P57739 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CLDN2P57739 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CLDN2P57739 AP003680.1-201ENST00000598970 3660 ntBASIC15.6■□□□□ 0.09
CLDN2P57739 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC15.6■□□□□ 0.09
CLDN2P57739 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CLDN2P57739 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
CLDN2P57739 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CLDN2P57739 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CLDN2P57739 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CLDN2P57739 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC15.6■□□□□ 0.09
CLDN2P57739 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CLDN2P57739 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC15.6■□□□□ 0.09
CLDN2P57739 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CLDN2P57739 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CLDN2P57739 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
CLDN2P57739 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CLDN2P57739 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CLDN2P57739 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CLDN2P57739 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CLDN2P57739 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
CLDN2P57739 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
CLDN2P57739 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
CLDN2P57739 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC15.59■□□□□ 0.09
CLDN2P57739 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC15.59■□□□□ 0.09
CLDN2P57739 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
CLDN2P57739 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CLDN2P57739 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CLDN2P57739 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
CLDN2P57739 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CLDN2P57739 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC15.59■□□□□ 0.09
CLDN2P57739 HIST1H2BPS3-201ENST00000419683 341 ntBASIC15.59■□□□□ 0.09
CLDN2P57739 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC15.59■□□□□ 0.09
CLDN2P57739 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC15.59■□□□□ 0.09
CLDN2P57739 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC15.59■□□□□ 0.09
CLDN2P57739 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CLDN2P57739 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC15.59■□□□□ 0.09
CLDN2P57739 ORC6-206ENST00000568364 888 ntTSL 5 BASIC15.59■□□□□ 0.09
CLDN2P57739 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC15.59■□□□□ 0.09
CLDN2P57739 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC15.59■□□□□ 0.09
CLDN2P57739 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC15.59■□□□□ 0.09
CLDN2P57739 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
CLDN2P57739 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC15.59■□□□□ 0.09
CLDN2P57739 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
CLDN2P57739 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC15.59■□□□□ 0.09
CLDN2P57739 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
CLDN2P57739 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
CLDN2P57739 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC15.59■□□□□ 0.09
CLDN2P57739 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CLDN2P57739 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
CLDN2P57739 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC15.59■□□□□ 0.09
CLDN2P57739 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC15.59■□□□□ 0.09
CLDN2P57739 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
CLDN2P57739 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC15.59■□□□□ 0.09
CLDN2P57739 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CLDN2P57739 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC15.59■□□□□ 0.09
CLDN2P57739 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
CLDN2P57739 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
CLDN2P57739 LINC02199-201ENST00000506655 2702 ntBASIC15.59■□□□□ 0.09
CLDN2P57739 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
CLDN2P57739 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC15.59■□□□□ 0.09
CLDN2P57739 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.09
CLDN2P57739 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
CLDN2P57739 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC15.58■□□□□ 0.09
CLDN2P57739 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC15.58■□□□□ 0.09
CLDN2P57739 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
CLDN2P57739 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
CLDN2P57739 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC15.58■□□□□ 0.08
CLDN2P57739 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC15.58■□□□□ 0.08
CLDN2P57739 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
CLDN2P57739 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC15.58■□□□□ 0.08
CLDN2P57739 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CLDN2P57739 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CLDN2P57739 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
CLDN2P57739 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC15.58■□□□□ 0.08
CLDN2P57739 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC15.58■□□□□ 0.08
CLDN2P57739 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
CLDN2P57739 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC15.58■□□□□ 0.08
CLDN2P57739 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CLDN2P57739 AC134915.1-201ENST00000426461 574 ntBASIC15.58■□□□□ 0.08
CLDN2P57739 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC15.58■□□□□ 0.08
CLDN2P57739 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CLDN2P57739 AL162726.2-201ENST00000438986 1017 ntBASIC15.58■□□□□ 0.08
CLDN2P57739 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC15.58■□□□□ 0.08
CLDN2P57739 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
CLDN2P57739 AC234783.1-201ENST00000441761 496 ntBASIC15.58■□□□□ 0.08
CLDN2P57739 VDAC1P7-201ENST00000462417 847 ntBASIC15.58■□□□□ 0.08
CLDN2P57739 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
CLDN2P57739 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC15.58■□□□□ 0.08
CLDN2P57739 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC15.58■□□□□ 0.08
CLDN2P57739 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC15.58■□□□□ 0.08
CLDN2P57739 SNX29P1-201ENST00000548357 1007 ntBASIC15.58■□□□□ 0.08
CLDN2P57739 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC15.58■□□□□ 0.08
CLDN2P57739 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC15.58■□□□□ 0.08
CLDN2P57739 MIR4259-201ENST00000584466 101 ntBASIC15.58■□□□□ 0.08
CLDN2P57739 AC015936.2-201ENST00000593177 259 ntBASIC15.58■□□□□ 0.08
CLDN2P57739 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC15.58■□□□□ 0.08
CLDN2P57739 AL049840.4-201ENST00000602422 811 ntBASIC15.58■□□□□ 0.08
CLDN2P57739 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC15.58■□□□□ 0.08
CLDN2P57739 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC15.58■□□□□ 0.08
CLDN2P57739 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 52.4 ms