Protein–RNA interactions for Protein: P52926

HMGA2, High mobility group protein HMGI-C, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2P52926 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC14.47□□□□□ -0.09
HMGA2P52926 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
HMGA2P52926 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
HMGA2P52926 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
HMGA2P52926 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
HMGA2P52926 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC14.47□□□□□ -0.09
HMGA2P52926 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
HMGA2P52926 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC14.47□□□□□ -0.09
HMGA2P52926 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
HMGA2P52926 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC14.47□□□□□ -0.09
HMGA2P52926 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
HMGA2P52926 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
HMGA2P52926 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
HMGA2P52926 COCH-203ENST00000460581 2688 ntTSL 2 BASIC14.47□□□□□ -0.09
HMGA2P52926 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
HMGA2P52926 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
HMGA2P52926 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC14.47□□□□□ -0.09
HMGA2P52926 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
HMGA2P52926 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC14.46□□□□□ -0.09
HMGA2P52926 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
HMGA2P52926 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
HMGA2P52926 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC14.46□□□□□ -0.09
HMGA2P52926 AC005912.2-201ENST00000619492 2400 ntBASIC14.46□□□□□ -0.09
HMGA2P52926 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
HMGA2P52926 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC14.46□□□□□ -0.09
HMGA2P52926 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
HMGA2P52926 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC14.46□□□□□ -0.09
HMGA2P52926 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
HMGA2P52926 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC14.46□□□□□ -0.09
HMGA2P52926 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
HMGA2P52926 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
HMGA2P52926 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC14.46□□□□□ -0.09
HMGA2P52926 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
HMGA2P52926 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC14.46□□□□□ -0.09
HMGA2P52926 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
HMGA2P52926 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.09
HMGA2P52926 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
HMGA2P52926 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
HMGA2P52926 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
HMGA2P52926 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
HMGA2P52926 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
HMGA2P52926 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC14.46□□□□□ -0.09
HMGA2P52926 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC14.46□□□□□ -0.09
HMGA2P52926 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC14.46□□□□□ -0.09
HMGA2P52926 MRPL3P1-201ENST00000400109 1033 ntBASIC14.46□□□□□ -0.09
HMGA2P52926 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC14.46□□□□□ -0.09
HMGA2P52926 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
HMGA2P52926 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC14.46□□□□□ -0.09
HMGA2P52926 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
HMGA2P52926 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
HMGA2P52926 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
HMGA2P52926 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC14.46□□□□□ -0.09
HMGA2P52926 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.1
HMGA2P52926 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
HMGA2P52926 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
HMGA2P52926 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.1
HMGA2P52926 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.1
HMGA2P52926 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
HMGA2P52926 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
HMGA2P52926 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
HMGA2P52926 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC14.45□□□□□ -0.1
HMGA2P52926 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC14.45□□□□□ -0.1
HMGA2P52926 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
HMGA2P52926 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
HMGA2P52926 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
HMGA2P52926 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
HMGA2P52926 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
HMGA2P52926 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC14.45□□□□□ -0.1
HMGA2P52926 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC14.45□□□□□ -0.1
HMGA2P52926 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
HMGA2P52926 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC14.45□□□□□ -0.1
HMGA2P52926 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
HMGA2P52926 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
HMGA2P52926 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
HMGA2P52926 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
HMGA2P52926 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
HMGA2P52926 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC14.45□□□□□ -0.1
HMGA2P52926 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC14.45□□□□□ -0.1
HMGA2P52926 CBR1-202ENST00000399191 838 ntTSL 3 BASIC14.45□□□□□ -0.1
HMGA2P52926 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
HMGA2P52926 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC14.45□□□□□ -0.1
HMGA2P52926 RNA5SP410-201ENST00000516285 106 ntBASIC14.45□□□□□ -0.1
HMGA2P52926 PENK-208ENST00000523051 772 ntTSL 5 BASIC14.45□□□□□ -0.1
HMGA2P52926 SSH2-211ENST00000590153 570 ntTSL 4 BASIC14.45□□□□□ -0.1
HMGA2P52926 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
HMGA2P52926 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC14.45□□□□□ -0.1
HMGA2P52926 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
HMGA2P52926 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC14.45□□□□□ -0.1
HMGA2P52926 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC14.45□□□□□ -0.1
HMGA2P52926 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
HMGA2P52926 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
HMGA2P52926 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
HMGA2P52926 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
HMGA2P52926 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
HMGA2P52926 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC14.44□□□□□ -0.1
HMGA2P52926 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
HMGA2P52926 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC14.44□□□□□ -0.1
HMGA2P52926 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
HMGA2P52926 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
HMGA2P52926 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms