Protein–RNA interactions for Protein: P37088

SCNN1A, Amiloride-sensitive sodium channel subunit alpha, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1AP37088 AP003680.1-201ENST00000598970 3660 ntBASIC16.41■□□□□ 0.22
SCNN1AP37088 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SCNN1AP37088 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
SCNN1AP37088 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
SCNN1AP37088 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
SCNN1AP37088 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
SCNN1AP37088 AL121723.1-201ENST00000445194 1519 ntBASIC16.41■□□□□ 0.22
SCNN1AP37088 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SCNN1AP37088 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
SCNN1AP37088 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
SCNN1AP37088 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
SCNN1AP37088 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SCNN1AP37088 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SCNN1AP37088 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SCNN1AP37088 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SCNN1AP37088 PKIG-203ENST00000372887 769 ntTSL 3 BASIC16.41■□□□□ 0.22
SCNN1AP37088 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC16.41■□□□□ 0.22
SCNN1AP37088 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC16.41■□□□□ 0.22
SCNN1AP37088 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC16.41■□□□□ 0.22
SCNN1AP37088 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC16.41■□□□□ 0.22
SCNN1AP37088 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC16.41■□□□□ 0.22
SCNN1AP37088 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC16.41■□□□□ 0.22
SCNN1AP37088 FTH1-202ENST00000526640 786 ntTSL 2 BASIC16.41■□□□□ 0.22
SCNN1AP37088 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC16.41■□□□□ 0.22
SCNN1AP37088 AJ011932.1-201ENST00000621707 465 ntBASIC16.41■□□□□ 0.22
SCNN1AP37088 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SCNN1AP37088 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SCNN1AP37088 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SCNN1AP37088 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
SCNN1AP37088 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC16.41■□□□□ 0.22
SCNN1AP37088 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SCNN1AP37088 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC16.41■□□□□ 0.22
SCNN1AP37088 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SCNN1AP37088 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SCNN1AP37088 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SCNN1AP37088 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC16.41■□□□□ 0.22
SCNN1AP37088 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SCNN1AP37088 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SCNN1AP37088 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SCNN1AP37088 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC16.4■□□□□ 0.22
SCNN1AP37088 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SCNN1AP37088 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SCNN1AP37088 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
SCNN1AP37088 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SCNN1AP37088 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC16.4■□□□□ 0.22
SCNN1AP37088 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
SCNN1AP37088 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC16.4■□□□□ 0.22
SCNN1AP37088 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC16.4■□□□□ 0.22
SCNN1AP37088 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SCNN1AP37088 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
SCNN1AP37088 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC16.4■□□□□ 0.22
SCNN1AP37088 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
SCNN1AP37088 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC16.4■□□□□ 0.22
SCNN1AP37088 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC16.4■□□□□ 0.22
SCNN1AP37088 FAM8A3P-201ENST00000427218 844 ntBASIC16.4■□□□□ 0.22
SCNN1AP37088 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC16.4■□□□□ 0.22
SCNN1AP37088 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC16.4■□□□□ 0.22
SCNN1AP37088 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC16.4■□□□□ 0.22
SCNN1AP37088 UBL5-208ENST00000593087 320 ntTSL 3 BASIC16.4■□□□□ 0.22
SCNN1AP37088 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC16.4■□□□□ 0.22
SCNN1AP37088 AL645728.2-202ENST00000641679 227 ntBASIC16.4■□□□□ 0.22
SCNN1AP37088 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SCNN1AP37088 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC16.4■□□□□ 0.22
SCNN1AP37088 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC16.4■□□□□ 0.22
SCNN1AP37088 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SCNN1AP37088 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SCNN1AP37088 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC16.4■□□□□ 0.22
SCNN1AP37088 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SCNN1AP37088 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SCNN1AP37088 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SCNN1AP37088 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC16.4■□□□□ 0.22
SCNN1AP37088 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
SCNN1AP37088 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SCNN1AP37088 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SCNN1AP37088 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
SCNN1AP37088 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC16.4■□□□□ 0.22
SCNN1AP37088 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.22
SCNN1AP37088 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC16.39■□□□□ 0.22
SCNN1AP37088 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
SCNN1AP37088 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
SCNN1AP37088 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SCNN1AP37088 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC16.39■□□□□ 0.21
SCNN1AP37088 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC16.39■□□□□ 0.21
SCNN1AP37088 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC16.39■□□□□ 0.21
SCNN1AP37088 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SCNN1AP37088 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
SCNN1AP37088 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SCNN1AP37088 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC16.39■□□□□ 0.21
SCNN1AP37088 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SCNN1AP37088 LCK-206ENST00000373564 2137 ntTSL 5 BASIC16.39■□□□□ 0.21
SCNN1AP37088 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC16.39■□□□□ 0.21
SCNN1AP37088 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC16.39■□□□□ 0.21
SCNN1AP37088 AC136621.1-201ENST00000624017 2304 ntBASIC16.39■□□□□ 0.21
SCNN1AP37088 MFF-204ENST00000353339 2186 ntTSL 5 BASIC16.39■□□□□ 0.21
SCNN1AP37088 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
SCNN1AP37088 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC16.39■□□□□ 0.21
SCNN1AP37088 INGX-202ENST00000489074 768 ntBASIC16.39■□□□□ 0.21
SCNN1AP37088 SPDYE18-201ENST00000510091 1050 ntBASIC16.39■□□□□ 0.21
SCNN1AP37088 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC16.39■□□□□ 0.21
SCNN1AP37088 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC16.39■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms