Protein–RNA interactions for Protein: P28749

RBL1, Retinoblastoma-like protein 1, humanhuman

Predictions only

Length 1,068 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBL1P28749 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
RBL1P28749 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RBL1P28749 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
RBL1P28749 ANKRD26P3-201ENST00000454044 2748 ntBASIC16.28■□□□□ 0.2
RBL1P28749 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RBL1P28749 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
RBL1P28749 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RBL1P28749 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RBL1P28749 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC16.28■□□□□ 0.2
RBL1P28749 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RBL1P28749 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RBL1P28749 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
RBL1P28749 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RBL1P28749 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RBL1P28749 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RBL1P28749 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RBL1P28749 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC16.27■□□□□ 0.2
RBL1P28749 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
RBL1P28749 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
RBL1P28749 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC16.27■□□□□ 0.2
RBL1P28749 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC16.27■□□□□ 0.2
RBL1P28749 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC16.27■□□□□ 0.2
RBL1P28749 AC211486.1-202ENST00000416371 468 ntBASIC16.27■□□□□ 0.2
RBL1P28749 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.2
RBL1P28749 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC16.27■□□□□ 0.2
RBL1P28749 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC16.27■□□□□ 0.2
RBL1P28749 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC16.27■□□□□ 0.2
RBL1P28749 AC211476.1-201ENST00000503899 468 ntBASIC16.27■□□□□ 0.2
RBL1P28749 AC092865.5-201ENST00000545435 363 ntBASIC16.27■□□□□ 0.2
RBL1P28749 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC16.27■□□□□ 0.2
RBL1P28749 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC16.27■□□□□ 0.2
RBL1P28749 AC009093.7-201ENST00000623853 1223 ntBASIC16.27■□□□□ 0.2
RBL1P28749 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC16.27■□□□□ 0.2
RBL1P28749 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RBL1P28749 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
RBL1P28749 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
RBL1P28749 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC16.27■□□□□ 0.19
RBL1P28749 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
RBL1P28749 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
RBL1P28749 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
RBL1P28749 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
RBL1P28749 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
RBL1P28749 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
RBL1P28749 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
RBL1P28749 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
RBL1P28749 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
RBL1P28749 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
RBL1P28749 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
RBL1P28749 C18orf15-201ENST00000623680 2534 ntBASIC16.26■□□□□ 0.19
RBL1P28749 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
RBL1P28749 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC16.26■□□□□ 0.19
RBL1P28749 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC16.26■□□□□ 0.19
RBL1P28749 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC16.26■□□□□ 0.19
RBL1P28749 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
RBL1P28749 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC16.26■□□□□ 0.19
RBL1P28749 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RBL1P28749 KLK8-202ENST00000320838 456 ntTSL 5 BASIC16.26■□□□□ 0.19
RBL1P28749 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
RBL1P28749 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC16.26■□□□□ 0.19
RBL1P28749 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC16.26■□□□□ 0.19
RBL1P28749 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC16.26■□□□□ 0.19
RBL1P28749 AC023141.5-201ENST00000458585 616 ntBASIC16.26■□□□□ 0.19
RBL1P28749 FXR1-221ENST00000491674 365 ntTSL 2 BASIC16.26■□□□□ 0.19
RBL1P28749 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC16.26■□□□□ 0.19
RBL1P28749 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
RBL1P28749 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RBL1P28749 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
RBL1P28749 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC16.26■□□□□ 0.19
RBL1P28749 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
RBL1P28749 SPIB-207ENST00000597855 564 ntTSL 4 BASIC16.26■□□□□ 0.19
RBL1P28749 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RBL1P28749 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RBL1P28749 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC16.26■□□□□ 0.19
RBL1P28749 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
RBL1P28749 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
RBL1P28749 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC16.26■□□□□ 0.19
RBL1P28749 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
RBL1P28749 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RBL1P28749 AL607033.1-201ENST00000623900 1599 ntBASIC16.26■□□□□ 0.19
RBL1P28749 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
RBL1P28749 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
RBL1P28749 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
RBL1P28749 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RBL1P28749 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RBL1P28749 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
RBL1P28749 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
RBL1P28749 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC16.25■□□□□ 0.19
RBL1P28749 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
RBL1P28749 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC16.25■□□□□ 0.19
RBL1P28749 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
RBL1P28749 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC16.25■□□□□ 0.19
RBL1P28749 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
RBL1P28749 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC16.25■□□□□ 0.19
RBL1P28749 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC16.25■□□□□ 0.19
RBL1P28749 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RBL1P28749 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC16.25■□□□□ 0.19
RBL1P28749 LITAF-210ENST00000571976 548 ntTSL 2 BASIC16.25■□□□□ 0.19
RBL1P28749 LITAF-214ENST00000574703 486 ntTSL 2 BASIC16.25■□□□□ 0.19
RBL1P28749 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RBL1P28749 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC16.25■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms