Protein–RNA interactions for Protein: P28288

ABCD3, ATP-binding cassette sub-family D member 3, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3P28288 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC14.63□□□□□ -0.07
ABCD3P28288 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
ABCD3P28288 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC14.63□□□□□ -0.07
ABCD3P28288 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
ABCD3P28288 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
ABCD3P28288 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
ABCD3P28288 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
ABCD3P28288 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC14.62□□□□□ -0.07
ABCD3P28288 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC14.62□□□□□ -0.07
ABCD3P28288 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC14.62□□□□□ -0.07
ABCD3P28288 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
ABCD3P28288 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
ABCD3P28288 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
ABCD3P28288 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC14.62□□□□□ -0.07
ABCD3P28288 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC14.62□□□□□ -0.07
ABCD3P28288 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
ABCD3P28288 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC14.62□□□□□ -0.07
ABCD3P28288 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC14.62□□□□□ -0.07
ABCD3P28288 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
ABCD3P28288 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
ABCD3P28288 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
ABCD3P28288 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
ABCD3P28288 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC14.62□□□□□ -0.07
ABCD3P28288 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC14.62□□□□□ -0.07
ABCD3P28288 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC14.62□□□□□ -0.07
ABCD3P28288 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
ABCD3P28288 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
ABCD3P28288 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
ABCD3P28288 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC14.62□□□□□ -0.07
ABCD3P28288 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
ABCD3P28288 RAC2-202ENST00000401529 569 ntTSL 4 BASIC14.62□□□□□ -0.07
ABCD3P28288 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC14.62□□□□□ -0.07
ABCD3P28288 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC14.62□□□□□ -0.07
ABCD3P28288 RAD18-204ENST00000418463 563 ntTSL 4 BASIC14.62□□□□□ -0.07
ABCD3P28288 RAD18-205ENST00000421052 582 ntTSL 3 BASIC14.62□□□□□ -0.07
ABCD3P28288 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
ABCD3P28288 TARDBPP1-201ENST00000442013 1203 ntBASIC14.62□□□□□ -0.07
ABCD3P28288 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
ABCD3P28288 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
ABCD3P28288 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC14.62□□□□□ -0.07
ABCD3P28288 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC14.62□□□□□ -0.07
ABCD3P28288 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
ABCD3P28288 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
ABCD3P28288 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
ABCD3P28288 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC14.62□□□□□ -0.07
ABCD3P28288 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC14.62□□□□□ -0.07
ABCD3P28288 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC14.62□□□□□ -0.07
ABCD3P28288 TEX48-202ENST00000612244 662 ntTSL 3 BASIC14.62□□□□□ -0.07
ABCD3P28288 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
ABCD3P28288 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC14.62□□□□□ -0.07
ABCD3P28288 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
ABCD3P28288 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
ABCD3P28288 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
ABCD3P28288 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
ABCD3P28288 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
ABCD3P28288 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
ABCD3P28288 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
ABCD3P28288 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
ABCD3P28288 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
ABCD3P28288 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
ABCD3P28288 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC14.62□□□□□ -0.07
ABCD3P28288 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC14.62□□□□□ -0.07
ABCD3P28288 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC14.61□□□□□ -0.07
ABCD3P28288 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
ABCD3P28288 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC14.61□□□□□ -0.07
ABCD3P28288 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
ABCD3P28288 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
ABCD3P28288 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
ABCD3P28288 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
ABCD3P28288 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC14.61□□□□□ -0.07
ABCD3P28288 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
ABCD3P28288 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC14.61□□□□□ -0.07
ABCD3P28288 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
ABCD3P28288 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
ABCD3P28288 AL607033.1-201ENST00000623900 1599 ntBASIC14.61□□□□□ -0.07
ABCD3P28288 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
ABCD3P28288 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
ABCD3P28288 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC14.61□□□□□ -0.07
ABCD3P28288 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC14.61□□□□□ -0.07
ABCD3P28288 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
ABCD3P28288 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
ABCD3P28288 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
ABCD3P28288 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC14.61□□□□□ -0.07
ABCD3P28288 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC14.61□□□□□ -0.07
ABCD3P28288 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
ABCD3P28288 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
ABCD3P28288 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
ABCD3P28288 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
ABCD3P28288 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC14.61□□□□□ -0.07
ABCD3P28288 WDR53-203ENST00000429115 683 ntTSL 2 BASIC14.61□□□□□ -0.07
ABCD3P28288 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
ABCD3P28288 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC14.61□□□□□ -0.07
ABCD3P28288 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
ABCD3P28288 RAB35-202ENST00000534951 939 ntTSL 2 BASIC14.61□□□□□ -0.07
ABCD3P28288 AC135586.1-201ENST00000539323 574 ntBASIC14.61□□□□□ -0.07
ABCD3P28288 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
ABCD3P28288 MIR4313-201ENST00000580760 101 ntBASIC14.61□□□□□ -0.07
ABCD3P28288 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC14.61□□□□□ -0.07
ABCD3P28288 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC14.61□□□□□ -0.07
ABCD3P28288 AC004840.1-201ENST00000636359 365 ntBASIC14.61□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms