Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
COL8A2P25067 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
COL8A2P25067 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC13.4□□□□□ -0.26
COL8A2P25067 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC13.4□□□□□ -0.26
COL8A2P25067 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
COL8A2P25067 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
COL8A2P25067 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC13.4□□□□□ -0.26
COL8A2P25067 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC13.4□□□□□ -0.26
COL8A2P25067 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC13.4□□□□□ -0.26
COL8A2P25067 ANKRD26P3-201ENST00000454044 2748 ntBASIC13.4□□□□□ -0.26
COL8A2P25067 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
COL8A2P25067 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
COL8A2P25067 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
COL8A2P25067 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC13.4□□□□□ -0.26
COL8A2P25067 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
COL8A2P25067 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC13.4□□□□□ -0.26
COL8A2P25067 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC13.4□□□□□ -0.26
COL8A2P25067 TARDBPP1-201ENST00000442013 1203 ntBASIC13.4□□□□□ -0.26
COL8A2P25067 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC13.4□□□□□ -0.26
COL8A2P25067 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC13.4□□□□□ -0.26
COL8A2P25067 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC13.4□□□□□ -0.26
COL8A2P25067 AC055876.2-201ENST00000531834 546 ntBASIC13.4□□□□□ -0.26
COL8A2P25067 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC13.4□□□□□ -0.26
COL8A2P25067 CR383656.12-201ENST00000549567 513 ntBASIC13.4□□□□□ -0.26
COL8A2P25067 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
COL8A2P25067 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC13.4□□□□□ -0.26
COL8A2P25067 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC13.4□□□□□ -0.26
COL8A2P25067 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC13.4□□□□□ -0.26
COL8A2P25067 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC13.4□□□□□ -0.26
COL8A2P25067 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
COL8A2P25067 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC13.4□□□□□ -0.26
COL8A2P25067 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC13.4□□□□□ -0.26
COL8A2P25067 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC13.4□□□□□ -0.26
COL8A2P25067 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
COL8A2P25067 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
COL8A2P25067 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
COL8A2P25067 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
COL8A2P25067 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
COL8A2P25067 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
COL8A2P25067 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
COL8A2P25067 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC13.4□□□□□ -0.26
COL8A2P25067 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
COL8A2P25067 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC13.4□□□□□ -0.26
COL8A2P25067 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC13.4□□□□□ -0.27
COL8A2P25067 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
COL8A2P25067 AL596087.1-201ENST00000400979 1969 ntBASIC13.4□□□□□ -0.27
COL8A2P25067 REXO1L1P-202ENST00000608646 1974 ntBASIC13.4□□□□□ -0.27
COL8A2P25067 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC13.4□□□□□ -0.27
COL8A2P25067 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
COL8A2P25067 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
COL8A2P25067 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC13.39□□□□□ -0.27
COL8A2P25067 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC13.39□□□□□ -0.27
COL8A2P25067 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
COL8A2P25067 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
COL8A2P25067 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC13.39□□□□□ -0.27
COL8A2P25067 SP100-205ENST00000409824 1802 ntTSL 5 BASIC13.39□□□□□ -0.27
COL8A2P25067 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
COL8A2P25067 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
COL8A2P25067 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
COL8A2P25067 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC13.39□□□□□ -0.27
COL8A2P25067 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC13.39□□□□□ -0.27
COL8A2P25067 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
COL8A2P25067 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
COL8A2P25067 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
COL8A2P25067 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
COL8A2P25067 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
COL8A2P25067 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
COL8A2P25067 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
COL8A2P25067 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC13.39□□□□□ -0.27
COL8A2P25067 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC13.39□□□□□ -0.27
COL8A2P25067 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC13.39□□□□□ -0.27
COL8A2P25067 COX5BP8-201ENST00000416911 349 ntBASIC13.39□□□□□ -0.27
COL8A2P25067 MEP1AP4-201ENST00000423244 1087 ntBASIC13.39□□□□□ -0.27
COL8A2P25067 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
COL8A2P25067 MYCLP2-201ENST00000449268 967 ntBASIC13.39□□□□□ -0.27
COL8A2P25067 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC13.39□□□□□ -0.27
COL8A2P25067 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC13.39□□□□□ -0.27
COL8A2P25067 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC13.39□□□□□ -0.27
COL8A2P25067 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC13.39□□□□□ -0.27
COL8A2P25067 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC13.39□□□□□ -0.27
COL8A2P25067 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC13.39□□□□□ -0.27
COL8A2P25067 AC007431.3-201ENST00000623221 587 ntBASIC13.39□□□□□ -0.27
COL8A2P25067 AC138969.3-201ENST00000546612 1459 ntBASIC13.39□□□□□ -0.27
COL8A2P25067 AC138932.2-201ENST00000548268 1459 ntBASIC13.39□□□□□ -0.27
COL8A2P25067 AC126755.4-201ENST00000549796 1459 ntBASIC13.39□□□□□ -0.27
COL8A2P25067 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
COL8A2P25067 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
COL8A2P25067 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
COL8A2P25067 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC13.39□□□□□ -0.27
COL8A2P25067 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC13.39□□□□□ -0.27
COL8A2P25067 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC13.39□□□□□ -0.27
COL8A2P25067 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
COL8A2P25067 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
COL8A2P25067 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC13.39□□□□□ -0.27
COL8A2P25067 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
COL8A2P25067 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
COL8A2P25067 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC13.39□□□□□ -0.27
COL8A2P25067 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC13.39□□□□□ -0.27
COL8A2P25067 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
COL8A2P25067 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 64.9 ms