Protein–RNA interactions for Protein: P04406

GAPDH, Glyceraldehyde-3-phosphate dehydrogenase, humanhuman

Known RBP Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDHP04406 AC091812.2-201ENST00000619081 385 ntBASIC13.34□□□□□ -0.27
GAPDHP04406 C20orf181-201ENST00000623918 480 ntBASIC13.34□□□□□ -0.27
GAPDHP04406 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
GAPDHP04406 BANP-203ENST00000393207 2438 ntTSL 2 BASIC13.34□□□□□ -0.27
GAPDHP04406 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
GAPDHP04406 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
GAPDHP04406 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
GAPDHP04406 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
GAPDHP04406 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
GAPDHP04406 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
GAPDHP04406 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
GAPDHP04406 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
GAPDHP04406 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
GAPDHP04406 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
GAPDHP04406 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC13.34□□□□□ -0.27
GAPDHP04406 AKAP8P1-201ENST00000434743 1349 ntBASIC13.34□□□□□ -0.27
GAPDHP04406 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
GAPDHP04406 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
GAPDHP04406 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
GAPDHP04406 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
GAPDHP04406 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
GAPDHP04406 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC13.34□□□□□ -0.27
GAPDHP04406 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
GAPDHP04406 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
GAPDHP04406 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
GAPDHP04406 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
GAPDHP04406 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
GAPDHP04406 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
GAPDHP04406 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC13.33□□□□□ -0.27
GAPDHP04406 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.27
GAPDHP04406 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.27
GAPDHP04406 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
GAPDHP04406 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC13.33□□□□□ -0.28
GAPDHP04406 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
GAPDHP04406 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
GAPDHP04406 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
GAPDHP04406 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
GAPDHP04406 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
GAPDHP04406 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
GAPDHP04406 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC13.33□□□□□ -0.28
GAPDHP04406 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
GAPDHP04406 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
GAPDHP04406 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC13.33□□□□□ -0.28
GAPDHP04406 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
GAPDHP04406 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
GAPDHP04406 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC13.33□□□□□ -0.28
GAPDHP04406 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC13.33□□□□□ -0.28
GAPDHP04406 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC13.33□□□□□ -0.28
GAPDHP04406 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
GAPDHP04406 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC13.33□□□□□ -0.28
GAPDHP04406 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC13.33□□□□□ -0.28
GAPDHP04406 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
GAPDHP04406 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC13.33□□□□□ -0.28
GAPDHP04406 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC13.33□□□□□ -0.28
GAPDHP04406 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC13.33□□□□□ -0.28
GAPDHP04406 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
GAPDHP04406 AL390755.1-201ENST00000623716 2027 ntBASIC13.33□□□□□ -0.28
GAPDHP04406 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
GAPDHP04406 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC13.33□□□□□ -0.28
GAPDHP04406 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
GAPDHP04406 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
GAPDHP04406 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
GAPDHP04406 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
GAPDHP04406 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
GAPDHP04406 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC13.33□□□□□ -0.28
GAPDHP04406 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
GAPDHP04406 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
GAPDHP04406 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
GAPDHP04406 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC13.33□□□□□ -0.28
GAPDHP04406 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC13.33□□□□□ -0.28
GAPDHP04406 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
GAPDHP04406 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
GAPDHP04406 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
GAPDHP04406 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
GAPDHP04406 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
GAPDHP04406 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
GAPDHP04406 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
GAPDHP04406 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
GAPDHP04406 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
GAPDHP04406 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
GAPDHP04406 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
GAPDHP04406 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC13.32□□□□□ -0.28
GAPDHP04406 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
GAPDHP04406 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
GAPDHP04406 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
GAPDHP04406 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
GAPDHP04406 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
GAPDHP04406 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
GAPDHP04406 AC232323.1-201ENST00000540724 2099 ntBASIC13.32□□□□□ -0.28
GAPDHP04406 REXO1L5P-201ENST00000622260 2098 ntBASIC13.32□□□□□ -0.28
GAPDHP04406 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
GAPDHP04406 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
GAPDHP04406 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
GAPDHP04406 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC13.32□□□□□ -0.28
GAPDHP04406 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
GAPDHP04406 AP000347.1-202ENST00000435868 847 ntBASIC13.32□□□□□ -0.28
GAPDHP04406 MKNK2P1-201ENST00000437526 628 ntBASIC13.32□□□□□ -0.28
GAPDHP04406 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC13.32□□□□□ -0.28
GAPDHP04406 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
GAPDHP04406 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC13.32□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 53.3 ms