Protein–RNA interactions for Protein: P01374

LTA, Lymphotoxin-alpha, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTAP01374 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
LTAP01374 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
LTAP01374 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
LTAP01374 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
LTAP01374 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC11.98□□□□□ -0.49
LTAP01374 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC11.98□□□□□ -0.49
LTAP01374 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC11.98□□□□□ -0.49
LTAP01374 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC11.98□□□□□ -0.49
LTAP01374 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC11.98□□□□□ -0.49
LTAP01374 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
LTAP01374 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC11.98□□□□□ -0.49
LTAP01374 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
LTAP01374 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
LTAP01374 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC11.98□□□□□ -0.49
LTAP01374 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
LTAP01374 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
LTAP01374 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC11.98□□□□□ -0.49
LTAP01374 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
LTAP01374 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC11.98□□□□□ -0.49
LTAP01374 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC11.98□□□□□ -0.49
LTAP01374 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
LTAP01374 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC11.98□□□□□ -0.49
LTAP01374 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC11.98□□□□□ -0.49
LTAP01374 AC109635.5-201ENST00000533593 962 ntBASIC11.98□□□□□ -0.49
LTAP01374 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC11.98□□□□□ -0.49
LTAP01374 AC243562.2-201ENST00000561247 970 ntBASIC11.98□□□□□ -0.49
LTAP01374 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC11.98□□□□□ -0.49
LTAP01374 AL078644.1-201ENST00000609881 752 ntBASIC11.98□□□□□ -0.49
LTAP01374 MIR1199-201ENST00000621445 119 ntBASIC11.98□□□□□ -0.49
LTAP01374 AP000550.4-202ENST00000639755 178 ntBASIC11.98□□□□□ -0.49
LTAP01374 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
LTAP01374 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
LTAP01374 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
LTAP01374 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC11.98□□□□□ -0.49
LTAP01374 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
LTAP01374 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC11.98□□□□□ -0.49
LTAP01374 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
LTAP01374 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
LTAP01374 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
LTAP01374 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
LTAP01374 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
LTAP01374 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC11.98□□□□□ -0.49
LTAP01374 TK2-221ENST00000620035 5060 ntTSL 2 BASIC11.98□□□□□ -0.49
LTAP01374 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
LTAP01374 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC11.98□□□□□ -0.49
LTAP01374 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
LTAP01374 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
LTAP01374 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC11.97□□□□□ -0.49
LTAP01374 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
LTAP01374 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC11.97□□□□□ -0.49
LTAP01374 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
LTAP01374 ZBTB45P2-201ENST00000452245 1531 ntBASIC11.97□□□□□ -0.49
LTAP01374 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC11.97□□□□□ -0.49
LTAP01374 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
LTAP01374 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
LTAP01374 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC11.97□□□□□ -0.49
LTAP01374 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC11.97□□□□□ -0.49
LTAP01374 AC140479.7-201ENST00000636301 2332 ntBASIC11.97□□□□□ -0.49
LTAP01374 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
LTAP01374 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC11.97□□□□□ -0.49
LTAP01374 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
LTAP01374 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
LTAP01374 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
LTAP01374 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC11.97□□□□□ -0.49
LTAP01374 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC11.97□□□□□ -0.49
LTAP01374 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
LTAP01374 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC11.97□□□□□ -0.49
LTAP01374 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
LTAP01374 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
LTAP01374 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC11.97□□□□□ -0.49
LTAP01374 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
LTAP01374 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC11.97□□□□□ -0.49
LTAP01374 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC11.97□□□□□ -0.49
LTAP01374 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC11.97□□□□□ -0.49
LTAP01374 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
LTAP01374 FAM8A3P-201ENST00000427218 844 ntBASIC11.97□□□□□ -0.49
LTAP01374 CXCL1P1-201ENST00000502804 216 ntBASIC11.97□□□□□ -0.49
LTAP01374 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC11.97□□□□□ -0.49
LTAP01374 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC11.97□□□□□ -0.49
LTAP01374 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC11.97□□□□□ -0.49
LTAP01374 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC11.97□□□□□ -0.49
LTAP01374 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC11.97□□□□□ -0.49
LTAP01374 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
LTAP01374 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC11.97□□□□□ -0.49
LTAP01374 PAM16-208ENST00000573553 722 ntTSL 2 BASIC11.97□□□□□ -0.49
LTAP01374 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
LTAP01374 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC11.97□□□□□ -0.49
LTAP01374 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC11.97□□□□□ -0.49
LTAP01374 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC11.97□□□□□ -0.49
LTAP01374 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC11.97□□□□□ -0.49
LTAP01374 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
LTAP01374 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
LTAP01374 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC11.97□□□□□ -0.49
LTAP01374 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
LTAP01374 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
LTAP01374 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC11.97□□□□□ -0.49
LTAP01374 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC11.97□□□□□ -0.49
LTAP01374 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
LTAP01374 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
LTAP01374 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms