Protein–RNA interactions for Protein: O75346

ZNF253, Zinc finger protein 253, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF253O75346 DUSP5P1-201ENST00000441325 1139 ntBASIC12.44□□□□□ -0.42
ZNF253O75346 AC073648.2-201ENST00000510116 352 ntBASIC12.44□□□□□ -0.42
ZNF253O75346 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC12.44□□□□□ -0.42
ZNF253O75346 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC12.44□□□□□ -0.42
ZNF253O75346 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
ZNF253O75346 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC12.44□□□□□ -0.42
ZNF253O75346 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC12.44□□□□□ -0.42
ZNF253O75346 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC12.44□□□□□ -0.42
ZNF253O75346 U1.21-201ENST00000580816 167 ntBASIC12.44□□□□□ -0.42
ZNF253O75346 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
ZNF253O75346 METTL23-204ENST00000586752 904 ntTSL 2 BASIC12.44□□□□□ -0.42
ZNF253O75346 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
ZNF253O75346 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC12.44□□□□□ -0.42
ZNF253O75346 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC12.44□□□□□ -0.42
ZNF253O75346 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC12.44□□□□□ -0.42
ZNF253O75346 AC008735.5-201ENST00000623544 497 ntBASIC12.44□□□□□ -0.42
ZNF253O75346 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC12.44□□□□□ -0.42
ZNF253O75346 AL645728.2-201ENST00000641974 660 ntBASIC12.44□□□□□ -0.42
ZNF253O75346 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC12.44□□□□□ -0.42
ZNF253O75346 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
ZNF253O75346 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
ZNF253O75346 AGPAT3-205ENST00000398063 5767 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
ZNF253O75346 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC12.44□□□□□ -0.42
ZNF253O75346 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
ZNF253O75346 AC016027.1-202ENST00000607927 1699 ntBASIC12.44□□□□□ -0.42
ZNF253O75346 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
ZNF253O75346 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC12.44□□□□□ -0.42
ZNF253O75346 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC12.44□□□□□ -0.42
ZNF253O75346 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC12.44□□□□□ -0.42
ZNF253O75346 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
ZNF253O75346 AC092919.2-201ENST00000623631 1645 ntBASIC12.44□□□□□ -0.42
ZNF253O75346 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC12.44□□□□□ -0.42
ZNF253O75346 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC12.44□□□□□ -0.42
ZNF253O75346 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
ZNF253O75346 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
ZNF253O75346 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC12.44□□□□□ -0.42
ZNF253O75346 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
ZNF253O75346 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
ZNF253O75346 AC007686.3-201ENST00000619017 3487 ntBASIC12.43□□□□□ -0.42
ZNF253O75346 AC008677.1-201ENST00000519230 1561 ntBASIC12.43□□□□□ -0.42
ZNF253O75346 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC12.43□□□□□ -0.42
ZNF253O75346 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC12.43□□□□□ -0.42
ZNF253O75346 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
ZNF253O75346 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC12.43□□□□□ -0.42
ZNF253O75346 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
ZNF253O75346 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC12.43□□□□□ -0.42
ZNF253O75346 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
ZNF253O75346 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
ZNF253O75346 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
ZNF253O75346 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
ZNF253O75346 ABCA7-202ENST00000433129 6704 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
ZNF253O75346 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
ZNF253O75346 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC12.43□□□□□ -0.42
ZNF253O75346 DNAJC27-207ENST00000534855 4831 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
ZNF253O75346 NDFIP2-205ENST00000612570 4648 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
ZNF253O75346 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
ZNF253O75346 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
ZNF253O75346 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
ZNF253O75346 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
ZNF253O75346 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC12.43□□□□□ -0.42
ZNF253O75346 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC12.43□□□□□ -0.42
ZNF253O75346 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC12.43□□□□□ -0.42
ZNF253O75346 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC12.43□□□□□ -0.42
ZNF253O75346 HCG4P8-203ENST00000443049 980 ntBASIC12.43□□□□□ -0.42
ZNF253O75346 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC12.43□□□□□ -0.42
ZNF253O75346 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC12.43□□□□□ -0.42
ZNF253O75346 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC12.43□□□□□ -0.42
ZNF253O75346 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC12.43□□□□□ -0.42
ZNF253O75346 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
ZNF253O75346 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC12.43□□□□□ -0.42
ZNF253O75346 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
ZNF253O75346 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC12.43□□□□□ -0.42
ZNF253O75346 PRELID1P1-202ENST00000567272 903 ntBASIC12.43□□□□□ -0.42
ZNF253O75346 PRR29-207ENST00000580752 458 ntTSL 3 BASIC12.43□□□□□ -0.42
ZNF253O75346 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC12.43□□□□□ -0.42
ZNF253O75346 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
ZNF253O75346 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
ZNF253O75346 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
ZNF253O75346 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
ZNF253O75346 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
ZNF253O75346 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC12.43□□□□□ -0.42
ZNF253O75346 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
ZNF253O75346 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC12.43□□□□□ -0.42
ZNF253O75346 DPYSL2-204ENST00000521913 4805 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
ZNF253O75346 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC12.43□□□□□ -0.42
ZNF253O75346 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC12.43□□□□□ -0.42
ZNF253O75346 POM121-201ENST00000358357 5320 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
ZNF253O75346 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
ZNF253O75346 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
ZNF253O75346 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC12.43□□□□□ -0.42
ZNF253O75346 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
ZNF253O75346 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC12.43□□□□□ -0.42
ZNF253O75346 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
ZNF253O75346 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
ZNF253O75346 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
ZNF253O75346 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
ZNF253O75346 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
ZNF253O75346 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
ZNF253O75346 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
ZNF253O75346 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms