Protein–RNA interactions for Protein: O15353

FOXN1, Forkhead box protein N1, humanhuman

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN1O15353 AC138627.1-207ENST00000641560 1006 ntBASIC18.89■□□□□ 0.61
FOXN1O15353 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC18.89■□□□□ 0.61
FOXN1O15353 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
FOXN1O15353 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
FOXN1O15353 SLC9A3P2-201ENST00000447821 2021 ntBASIC18.89■□□□□ 0.61
FOXN1O15353 TOP3BP1-201ENST00000420768 1380 ntBASIC18.89■□□□□ 0.61
FOXN1O15353 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
FOXN1O15353 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
FOXN1O15353 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
FOXN1O15353 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC18.89■□□□□ 0.61
FOXN1O15353 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
FOXN1O15353 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
FOXN1O15353 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
FOXN1O15353 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC18.89■□□□□ 0.61
FOXN1O15353 AC131009.4-201ENST00000624048 1740 ntBASIC18.88■□□□□ 0.61
FOXN1O15353 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
FOXN1O15353 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
FOXN1O15353 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
FOXN1O15353 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
FOXN1O15353 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
FOXN1O15353 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
FOXN1O15353 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
FOXN1O15353 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
FOXN1O15353 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
FOXN1O15353 RHCE-202ENST00000340849 1087 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
FOXN1O15353 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC18.88■□□□□ 0.61
FOXN1O15353 PENK-202ENST00000451791 1029 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
FOXN1O15353 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC18.88■□□□□ 0.61
FOXN1O15353 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
FOXN1O15353 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC18.88■□□□□ 0.61
FOXN1O15353 TMBIM4-205ENST00000535812 766 ntTSL 4 BASIC18.88■□□□□ 0.61
FOXN1O15353 TMBIM4-212ENST00000556010 610 ntTSL 5 BASIC18.88■□□□□ 0.61
FOXN1O15353 NAA38-207ENST00000576861 556 ntTSL 3 BASIC18.88■□□□□ 0.61
FOXN1O15353 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC18.88■□□□□ 0.61
FOXN1O15353 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC18.88■□□□□ 0.61
FOXN1O15353 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
FOXN1O15353 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
FOXN1O15353 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
FOXN1O15353 DEK-201ENST00000244776 1441 ntTSL 2 BASIC18.88■□□□□ 0.61
FOXN1O15353 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
FOXN1O15353 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
FOXN1O15353 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
FOXN1O15353 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC18.88■□□□□ 0.61
FOXN1O15353 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
FOXN1O15353 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
FOXN1O15353 AL512652.2-201ENST00000625156 1716 ntBASIC18.88■□□□□ 0.61
FOXN1O15353 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
FOXN1O15353 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
FOXN1O15353 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC18.88■□□□□ 0.61
FOXN1O15353 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
FOXN1O15353 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
FOXN1O15353 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
FOXN1O15353 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
FOXN1O15353 TCL1B-201ENST00000340722 1166 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
FOXN1O15353 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
FOXN1O15353 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
FOXN1O15353 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
FOXN1O15353 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
FOXN1O15353 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC18.87■□□□□ 0.61
FOXN1O15353 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
FOXN1O15353 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
FOXN1O15353 AC007952.2-201ENST00000399091 1176 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
FOXN1O15353 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC18.87■□□□□ 0.61
FOXN1O15353 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC18.87■□□□□ 0.61
FOXN1O15353 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC18.87■□□□□ 0.61
FOXN1O15353 AL355864.2-201ENST00000447420 863 ntBASIC18.87■□□□□ 0.61
FOXN1O15353 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC18.87■□□□□ 0.61
FOXN1O15353 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC18.87■□□□□ 0.61
FOXN1O15353 TSACC-208ENST00000481479 741 ntTSL 2 BASIC18.87■□□□□ 0.61
FOXN1O15353 AC091804.1-201ENST00000486888 567 ntBASIC18.87■□□□□ 0.61
FOXN1O15353 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC18.87■□□□□ 0.61
FOXN1O15353 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC18.87■□□□□ 0.61
FOXN1O15353 TIMM17BP1-201ENST00000545713 516 ntBASIC18.87■□□□□ 0.61
FOXN1O15353 PTP4A1P2-201ENST00000546033 454 ntBASIC18.87■□□□□ 0.61
FOXN1O15353 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC18.87■□□□□ 0.61
FOXN1O15353 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
FOXN1O15353 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC18.87■□□□□ 0.61
FOXN1O15353 LINC00116-203ENST00000611969 441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
FOXN1O15353 MIR6069-201ENST00000620069 79 ntBASIC18.87■□□□□ 0.61
FOXN1O15353 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC18.87■□□□□ 0.61
FOXN1O15353 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
FOXN1O15353 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
FOXN1O15353 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC18.87■□□□□ 0.61
FOXN1O15353 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
FOXN1O15353 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
FOXN1O15353 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC18.86■□□□□ 0.61
FOXN1O15353 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
FOXN1O15353 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC18.86■□□□□ 0.61
FOXN1O15353 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
FOXN1O15353 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC18.86■□□□□ 0.61
FOXN1O15353 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC18.86■□□□□ 0.61
FOXN1O15353 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
FOXN1O15353 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
FOXN1O15353 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
FOXN1O15353 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
FOXN1O15353 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
FOXN1O15353 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
FOXN1O15353 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC18.86■□□□□ 0.61
FOXN1O15353 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC18.86■□□□□ 0.61
FOXN1O15353 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms