Protein–RNA interactions for Protein: O00329

PIK3CD, Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit delta isoform, humanhuman

Predictions only

Length 1,044 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PIK3CDO00329 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC17.82■□□□□ 0.44
PIK3CDO00329 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC17.82■□□□□ 0.44
PIK3CDO00329 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
PIK3CDO00329 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
PIK3CDO00329 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
PIK3CDO00329 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC17.81■□□□□ 0.44
PIK3CDO00329 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PIK3CDO00329 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
PIK3CDO00329 LINC02199-201ENST00000506655 2702 ntBASIC17.81■□□□□ 0.44
PIK3CDO00329 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC17.81■□□□□ 0.44
PIK3CDO00329 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
PIK3CDO00329 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
PIK3CDO00329 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
PIK3CDO00329 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
PIK3CDO00329 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
PIK3CDO00329 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PIK3CDO00329 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
PIK3CDO00329 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PIK3CDO00329 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
PIK3CDO00329 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC17.81■□□□□ 0.44
PIK3CDO00329 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC17.81■□□□□ 0.44
PIK3CDO00329 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC17.81■□□□□ 0.44
PIK3CDO00329 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC17.81■□□□□ 0.44
PIK3CDO00329 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC17.81■□□□□ 0.44
PIK3CDO00329 ABBA01031660.1-201ENST00000635219 756 ntBASIC17.81■□□□□ 0.44
PIK3CDO00329 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC17.81■□□□□ 0.44
PIK3CDO00329 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PIK3CDO00329 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
PIK3CDO00329 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC17.81■□□□□ 0.44
PIK3CDO00329 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PIK3CDO00329 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC17.81■□□□□ 0.44
PIK3CDO00329 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC17.81■□□□□ 0.44
PIK3CDO00329 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PIK3CDO00329 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
PIK3CDO00329 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
PIK3CDO00329 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
PIK3CDO00329 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC17.81■□□□□ 0.44
PIK3CDO00329 KRT8P22-201ENST00000562317 1415 ntBASIC17.81■□□□□ 0.44
PIK3CDO00329 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC17.81■□□□□ 0.44
PIK3CDO00329 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC17.8■□□□□ 0.44
PIK3CDO00329 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PIK3CDO00329 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
PIK3CDO00329 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC17.8■□□□□ 0.44
PIK3CDO00329 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
PIK3CDO00329 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PIK3CDO00329 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC17.8■□□□□ 0.44
PIK3CDO00329 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
PIK3CDO00329 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
PIK3CDO00329 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PIK3CDO00329 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PIK3CDO00329 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PIK3CDO00329 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PIK3CDO00329 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
PIK3CDO00329 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC17.8■□□□□ 0.44
PIK3CDO00329 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
PIK3CDO00329 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC17.8■□□□□ 0.44
PIK3CDO00329 CFL1-212ENST00000531413 636 ntTSL 3 BASIC17.8■□□□□ 0.44
PIK3CDO00329 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC17.8■□□□□ 0.44
PIK3CDO00329 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC17.8■□□□□ 0.44
PIK3CDO00329 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC17.8■□□□□ 0.44
PIK3CDO00329 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PIK3CDO00329 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
PIK3CDO00329 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PIK3CDO00329 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PIK3CDO00329 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC17.8■□□□□ 0.44
PIK3CDO00329 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PIK3CDO00329 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
PIK3CDO00329 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC17.8■□□□□ 0.44
PIK3CDO00329 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PIK3CDO00329 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
PIK3CDO00329 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
PIK3CDO00329 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PIK3CDO00329 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC17.79■□□□□ 0.44
PIK3CDO00329 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC17.79■□□□□ 0.44
PIK3CDO00329 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC17.79■□□□□ 0.44
PIK3CDO00329 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC17.79■□□□□ 0.44
PIK3CDO00329 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC17.79■□□□□ 0.44
PIK3CDO00329 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PIK3CDO00329 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
PIK3CDO00329 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PIK3CDO00329 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC17.79■□□□□ 0.44
PIK3CDO00329 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
PIK3CDO00329 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC17.79■□□□□ 0.44
PIK3CDO00329 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC17.79■□□□□ 0.44
PIK3CDO00329 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PIK3CDO00329 C1QBPP1-201ENST00000400117 770 ntBASIC17.79■□□□□ 0.44
PIK3CDO00329 SOCS2P1-201ENST00000417727 557 ntBASIC17.79■□□□□ 0.44
PIK3CDO00329 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
PIK3CDO00329 AC007389.4-201ENST00000454674 793 ntBASIC17.79■□□□□ 0.44
PIK3CDO00329 NAA50-208ENST00000497255 789 ntTSL 5 BASIC17.79■□□□□ 0.44
PIK3CDO00329 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC17.79■□□□□ 0.44
PIK3CDO00329 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC17.79■□□□□ 0.44
PIK3CDO00329 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
PIK3CDO00329 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC17.79■□□□□ 0.44
PIK3CDO00329 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC17.79■□□□□ 0.44
PIK3CDO00329 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
PIK3CDO00329 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
PIK3CDO00329 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
PIK3CDO00329 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
PIK3CDO00329 AC022188.1-201ENST00000620960 1664 ntBASIC17.79■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 48 ms