Protein–RNA interactions for Protein: Q9Y5S2

CDC42BPB, Serine/threonine-protein kinase MRCK beta, humanhuman

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPBQ9Y5S2 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC23.38■■□□□ 1.33
CDC42BPBQ9Y5S2 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
CDC42BPBQ9Y5S2 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC23.38■■□□□ 1.33
CDC42BPBQ9Y5S2 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC23.38■■□□□ 1.33
CDC42BPBQ9Y5S2 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC23.38■■□□□ 1.33
CDC42BPBQ9Y5S2 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC23.38■■□□□ 1.33
CDC42BPBQ9Y5S2 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC23.38■■□□□ 1.33
CDC42BPBQ9Y5S2 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
CDC42BPBQ9Y5S2 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
CDC42BPBQ9Y5S2 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
CDC42BPBQ9Y5S2 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
CDC42BPBQ9Y5S2 TMEM254-204ENST00000372277 366 ntTSL 5 BASIC23.38■■□□□ 1.33
CDC42BPBQ9Y5S2 PPIE-203ENST00000372830 1198 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
CDC42BPBQ9Y5S2 MIR769-201ENST00000390225 118 ntBASIC23.38■■□□□ 1.33
CDC42BPBQ9Y5S2 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
CDC42BPBQ9Y5S2 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC23.38■■□□□ 1.33
CDC42BPBQ9Y5S2 DLGAP4-AS1-202ENST00000433238 593 ntTSL 3 BASIC23.38■■□□□ 1.33
CDC42BPBQ9Y5S2 AC005920.3-202ENST00000512717 789 ntTSL 3 BASIC23.38■■□□□ 1.33
CDC42BPBQ9Y5S2 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC23.38■■□□□ 1.33
CDC42BPBQ9Y5S2 AC015660.1-201ENST00000560103 395 ntTSL 3 BASIC23.38■■□□□ 1.33
CDC42BPBQ9Y5S2 AC008743.1-201ENST00000596350 813 ntTSL 4 BASIC23.38■■□□□ 1.33
CDC42BPBQ9Y5S2 COX10-AS1-206ENST00000602743 576 ntTSL 5 BASIC23.38■■□□□ 1.33
CDC42BPBQ9Y5S2 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC23.38■■□□□ 1.33
CDC42BPBQ9Y5S2 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC23.38■■□□□ 1.33
CDC42BPBQ9Y5S2 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
CDC42BPBQ9Y5S2 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
CDC42BPBQ9Y5S2 HMGN3-201ENST00000275036 831 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
CDC42BPBQ9Y5S2 HMGN3-202ENST00000344726 872 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
CDC42BPBQ9Y5S2 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
CDC42BPBQ9Y5S2 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC23.37■■□□□ 1.33
CDC42BPBQ9Y5S2 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC23.37■■□□□ 1.33
CDC42BPBQ9Y5S2 RN7SL720P-201ENST00000488178 304 ntBASIC23.37■■□□□ 1.33
CDC42BPBQ9Y5S2 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC23.37■■□□□ 1.33
CDC42BPBQ9Y5S2 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC23.37■■□□□ 1.33
CDC42BPBQ9Y5S2 DIO1-215ENST00000610607 796 ntTSL 5 BASIC23.37■■□□□ 1.33
CDC42BPBQ9Y5S2 AP000346.4-201ENST00000614827 381 ntBASIC23.37■■□□□ 1.33
CDC42BPBQ9Y5S2 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC23.37■■□□□ 1.33
CDC42BPBQ9Y5S2 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC23.37■■□□□ 1.33
CDC42BPBQ9Y5S2 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
CDC42BPBQ9Y5S2 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC23.37■■□□□ 1.33
CDC42BPBQ9Y5S2 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
CDC42BPBQ9Y5S2 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC23.37■■□□□ 1.33
CDC42BPBQ9Y5S2 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC23.37■■□□□ 1.33
CDC42BPBQ9Y5S2 ANKRD30BP2-201ENST00000435744 1610 ntBASIC23.37■■□□□ 1.33
CDC42BPBQ9Y5S2 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
CDC42BPBQ9Y5S2 RBFOX2-201ENST00000262829 1538 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
CDC42BPBQ9Y5S2 AC005332.8-201ENST00000622750 2735 ntBASIC23.36■■□□□ 1.33
CDC42BPBQ9Y5S2 RN7SKP175-201ENST00000408472 289 ntBASIC23.36■■□□□ 1.33
CDC42BPBQ9Y5S2 AL391832.2-201ENST00000418557 889 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
CDC42BPBQ9Y5S2 LINC01088-201ENST00000437737 973 ntTSL 5 BASIC23.36■■□□□ 1.33
CDC42BPBQ9Y5S2 AC009088.2-201ENST00000564743 463 ntTSL 5 BASIC23.36■■□□□ 1.33
CDC42BPBQ9Y5S2 LGALS9C-215ENST00000584941 1104 ntTSL 5 BASIC23.36■■□□□ 1.33
CDC42BPBQ9Y5S2 CDK7-214ENST00000626796 358 ntTSL 5 BASIC23.36■■□□□ 1.33
CDC42BPBQ9Y5S2 CDK7-215ENST00000629350 1149 ntTSL 5 BASIC23.36■■□□□ 1.33
CDC42BPBQ9Y5S2 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC23.36■■□□□ 1.33
CDC42BPBQ9Y5S2 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC23.36■■□□□ 1.33
CDC42BPBQ9Y5S2 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC23.36■■□□□ 1.33
CDC42BPBQ9Y5S2 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
CDC42BPBQ9Y5S2 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC23.36■■□□□ 1.33
CDC42BPBQ9Y5S2 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC23.36■■□□□ 1.33
CDC42BPBQ9Y5S2 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
CDC42BPBQ9Y5S2 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC23.36■■□□□ 1.33
CDC42BPBQ9Y5S2 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC23.36■■□□□ 1.33
CDC42BPBQ9Y5S2 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
CDC42BPBQ9Y5S2 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
CDC42BPBQ9Y5S2 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC23.36■■□□□ 1.33
CDC42BPBQ9Y5S2 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
CDC42BPBQ9Y5S2 TUBBP5-203ENST00000508529 1334 ntBASIC23.36■■□□□ 1.33
CDC42BPBQ9Y5S2 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC23.36■■□□□ 1.33
CDC42BPBQ9Y5S2 THOC6-201ENST00000253952 1246 ntTSL 2 BASIC23.36■■□□□ 1.33
CDC42BPBQ9Y5S2 PENK-202ENST00000451791 1029 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
CDC42BPBQ9Y5S2 CFL1-214ENST00000534769 758 ntTSL 2 BASIC23.36■■□□□ 1.33
CDC42BPBQ9Y5S2 AC079336.7-201ENST00000623428 1078 ntBASIC23.36■■□□□ 1.33
CDC42BPBQ9Y5S2 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC23.36■■□□□ 1.33
CDC42BPBQ9Y5S2 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC23.35■■□□□ 1.33
CDC42BPBQ9Y5S2 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC23.35■■□□□ 1.33
CDC42BPBQ9Y5S2 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
CDC42BPBQ9Y5S2 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC23.35■■□□□ 1.33
CDC42BPBQ9Y5S2 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
CDC42BPBQ9Y5S2 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC23.35■■□□□ 1.33
CDC42BPBQ9Y5S2 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
CDC42BPBQ9Y5S2 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
CDC42BPBQ9Y5S2 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC23.35■■□□□ 1.33
CDC42BPBQ9Y5S2 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC23.35■■□□□ 1.33
CDC42BPBQ9Y5S2 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
CDC42BPBQ9Y5S2 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC23.35■■□□□ 1.33
CDC42BPBQ9Y5S2 UBXN11-207ENST00000374223 1312 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
CDC42BPBQ9Y5S2 SPAG11A-203ENST00000351436 534 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
CDC42BPBQ9Y5S2 SPAG11B-204ENST00000361111 534 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
CDC42BPBQ9Y5S2 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC23.35■■□□□ 1.33
CDC42BPBQ9Y5S2 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC23.35■■□□□ 1.33
CDC42BPBQ9Y5S2 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC23.35■■□□□ 1.33
CDC42BPBQ9Y5S2 PARVG-202ENST00000415224 999 ntTSL 2 BASIC23.35■■□□□ 1.33
CDC42BPBQ9Y5S2 LY6G6C-202ENST00000495859 937 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
CDC42BPBQ9Y5S2 AC134698.3-201ENST00000523880 214 ntBASIC23.35■■□□□ 1.33
CDC42BPBQ9Y5S2 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC23.35■■□□□ 1.33
CDC42BPBQ9Y5S2 AC011447.3-201ENST00000590606 722 ntTSL 3 BASIC23.35■■□□□ 1.33
CDC42BPBQ9Y5S2 LRWD1-209ENST00000626402 138 ntTSL 3 BASIC23.35■■□□□ 1.33
CDC42BPBQ9Y5S2 AL603764.1-201ENST00000636452 321 ntBASIC23.35■■□□□ 1.33
CDC42BPBQ9Y5S2 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC23.35■■□□□ 1.33
Retrieved 100 of 98,524 protein–RNA pairs in 59.6 ms