Protein–RNA interactions for Protein: Q9Y2W7

KCNIP3, Calsenilin, humanhuman

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3Q9Y2W7 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
KCNIP3Q9Y2W7 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
KCNIP3Q9Y2W7 NCOR2-202ENST00000404121 7175 ntTSL 5 BASIC13.36□□□□□ -0.27
KCNIP3Q9Y2W7 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
KCNIP3Q9Y2W7 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
KCNIP3Q9Y2W7 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC13.36□□□□□ -0.27
KCNIP3Q9Y2W7 KIAA0513-202ENST00000538274 7381 ntTSL 2 BASIC13.36□□□□□ -0.27
KCNIP3Q9Y2W7 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC13.36□□□□□ -0.27
KCNIP3Q9Y2W7 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
KCNIP3Q9Y2W7 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
KCNIP3Q9Y2W7 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
KCNIP3Q9Y2W7 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC13.36□□□□□ -0.27
KCNIP3Q9Y2W7 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
KCNIP3Q9Y2W7 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC13.36□□□□□ -0.27
KCNIP3Q9Y2W7 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC13.36□□□□□ -0.27
KCNIP3Q9Y2W7 PPP1R26P4-201ENST00000619065 3527 ntBASIC13.36□□□□□ -0.27
KCNIP3Q9Y2W7 PEG13-201ENST00000631594 5667 ntBASIC13.36□□□□□ -0.27
KCNIP3Q9Y2W7 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC13.36□□□□□ -0.27
KCNIP3Q9Y2W7 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
KCNIP3Q9Y2W7 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
KCNIP3Q9Y2W7 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
KCNIP3Q9Y2W7 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
KCNIP3Q9Y2W7 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
KCNIP3Q9Y2W7 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC13.36□□□□□ -0.27
KCNIP3Q9Y2W7 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
KCNIP3Q9Y2W7 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
KCNIP3Q9Y2W7 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC13.36□□□□□ -0.27
KCNIP3Q9Y2W7 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
KCNIP3Q9Y2W7 MTRF1LP2-201ENST00000506027 1122 ntBASIC13.36□□□□□ -0.27
KCNIP3Q9Y2W7 FICD-205ENST00000552758 603 ntTSL 2 BASIC13.36□□□□□ -0.27
KCNIP3Q9Y2W7 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
KCNIP3Q9Y2W7 METTL23-204ENST00000586752 904 ntTSL 2 BASIC13.36□□□□□ -0.27
KCNIP3Q9Y2W7 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC13.36□□□□□ -0.27
KCNIP3Q9Y2W7 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
KCNIP3Q9Y2W7 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC13.36□□□□□ -0.27
KCNIP3Q9Y2W7 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
KCNIP3Q9Y2W7 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
KCNIP3Q9Y2W7 SUCO-201ENST00000263688 5556 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
KCNIP3Q9Y2W7 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC13.36□□□□□ -0.27
KCNIP3Q9Y2W7 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
KCNIP3Q9Y2W7 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC13.36□□□□□ -0.27
KCNIP3Q9Y2W7 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
KCNIP3Q9Y2W7 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
KCNIP3Q9Y2W7 PARN-202ENST00000420015 2360 ntTSL 2 BASIC13.36□□□□□ -0.27
KCNIP3Q9Y2W7 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
KCNIP3Q9Y2W7 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
KCNIP3Q9Y2W7 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
KCNIP3Q9Y2W7 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
KCNIP3Q9Y2W7 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC13.36□□□□□ -0.27
KCNIP3Q9Y2W7 USP31-203ENST00000567975 2142 ntTSL 2 BASIC13.36□□□□□ -0.27
KCNIP3Q9Y2W7 IGF2BP1-201ENST00000290341 8274 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
KCNIP3Q9Y2W7 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
KCNIP3Q9Y2W7 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC13.36□□□□□ -0.27
KCNIP3Q9Y2W7 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC13.36□□□□□ -0.27
KCNIP3Q9Y2W7 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
KCNIP3Q9Y2W7 CRYBG2-201ENST00000308182 5245 ntAPPRIS P5 TSL 5 BASIC13.36□□□□□ -0.27
KCNIP3Q9Y2W7 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
KCNIP3Q9Y2W7 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
KCNIP3Q9Y2W7 COL20A1-203ENST00000422202 8097 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
KCNIP3Q9Y2W7 ARAP3-201ENST00000239440 5250 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
KCNIP3Q9Y2W7 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
KCNIP3Q9Y2W7 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
KCNIP3Q9Y2W7 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
KCNIP3Q9Y2W7 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC13.35□□□□□ -0.27
KCNIP3Q9Y2W7 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC13.35□□□□□ -0.27
KCNIP3Q9Y2W7 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
KCNIP3Q9Y2W7 IFRD1-205ENST00000429071 1938 ntTSL 2 BASIC13.35□□□□□ -0.27
KCNIP3Q9Y2W7 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
KCNIP3Q9Y2W7 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
KCNIP3Q9Y2W7 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC13.35□□□□□ -0.27
KCNIP3Q9Y2W7 PCDHB16-201ENST00000609684 5001 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
KCNIP3Q9Y2W7 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC13.35□□□□□ -0.27
KCNIP3Q9Y2W7 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
KCNIP3Q9Y2W7 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
KCNIP3Q9Y2W7 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
KCNIP3Q9Y2W7 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC13.35□□□□□ -0.27
KCNIP3Q9Y2W7 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
KCNIP3Q9Y2W7 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC13.35□□□□□ -0.27
KCNIP3Q9Y2W7 SERTAD2-201ENST00000313349 5549 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
KCNIP3Q9Y2W7 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
KCNIP3Q9Y2W7 GUK1-204ENST00000366721 689 ntTSL 3 BASIC13.35□□□□□ -0.27
KCNIP3Q9Y2W7 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC13.35□□□□□ -0.27
KCNIP3Q9Y2W7 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
KCNIP3Q9Y2W7 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
KCNIP3Q9Y2W7 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC13.35□□□□□ -0.27
KCNIP3Q9Y2W7 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC13.35□□□□□ -0.27
KCNIP3Q9Y2W7 AL031133.1-201ENST00000406807 723 ntBASIC13.35□□□□□ -0.27
KCNIP3Q9Y2W7 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC13.35□□□□□ -0.27
KCNIP3Q9Y2W7 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC13.35□□□□□ -0.27
KCNIP3Q9Y2W7 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC13.35□□□□□ -0.27
KCNIP3Q9Y2W7 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC13.35□□□□□ -0.27
KCNIP3Q9Y2W7 PPOX-219ENST00000544598 813 ntTSL 2 BASIC13.35□□□□□ -0.27
KCNIP3Q9Y2W7 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC13.35□□□□□ -0.27
KCNIP3Q9Y2W7 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC13.35□□□□□ -0.27
KCNIP3Q9Y2W7 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC13.35□□□□□ -0.27
KCNIP3Q9Y2W7 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC13.35□□□□□ -0.27
KCNIP3Q9Y2W7 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC13.35□□□□□ -0.27
KCNIP3Q9Y2W7 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC13.35□□□□□ -0.27
KCNIP3Q9Y2W7 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC13.35□□□□□ -0.27
KCNIP3Q9Y2W7 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC13.35□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms