Protein–RNA interactions for Protein: Q9HCJ2

LRRC4C, Leucine-rich repeat-containing protein 4C, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC4CQ9HCJ2 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC16.36■□□□□ 0.21
LRRC4CQ9HCJ2 AC005840.4-201ENST00000541242 2494 ntBASIC16.36■□□□□ 0.21
LRRC4CQ9HCJ2 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC16.36■□□□□ 0.21
LRRC4CQ9HCJ2 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
LRRC4CQ9HCJ2 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
LRRC4CQ9HCJ2 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC16.35■□□□□ 0.21
LRRC4CQ9HCJ2 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC16.35■□□□□ 0.21
LRRC4CQ9HCJ2 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LRRC4CQ9HCJ2 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LRRC4CQ9HCJ2 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
LRRC4CQ9HCJ2 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LRRC4CQ9HCJ2 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC16.35■□□□□ 0.21
LRRC4CQ9HCJ2 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LRRC4CQ9HCJ2 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC16.35■□□□□ 0.21
LRRC4CQ9HCJ2 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LRRC4CQ9HCJ2 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LRRC4CQ9HCJ2 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LRRC4CQ9HCJ2 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC16.35■□□□□ 0.21
LRRC4CQ9HCJ2 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC16.35■□□□□ 0.21
LRRC4CQ9HCJ2 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
LRRC4CQ9HCJ2 SLC4A1APP2-201ENST00000424054 1259 ntBASIC16.35■□□□□ 0.21
LRRC4CQ9HCJ2 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
LRRC4CQ9HCJ2 AC108751.1-201ENST00000490852 363 ntBASIC16.35■□□□□ 0.21
LRRC4CQ9HCJ2 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC16.35■□□□□ 0.21
LRRC4CQ9HCJ2 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
LRRC4CQ9HCJ2 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC16.35■□□□□ 0.21
LRRC4CQ9HCJ2 MIR4321-201ENST00000592276 80 ntBASIC16.35■□□□□ 0.21
LRRC4CQ9HCJ2 AL078644.1-201ENST00000609881 752 ntBASIC16.35■□□□□ 0.21
LRRC4CQ9HCJ2 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LRRC4CQ9HCJ2 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LRRC4CQ9HCJ2 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC16.35■□□□□ 0.21
LRRC4CQ9HCJ2 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC16.35■□□□□ 0.21
LRRC4CQ9HCJ2 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC16.35■□□□□ 0.21
LRRC4CQ9HCJ2 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
LRRC4CQ9HCJ2 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LRRC4CQ9HCJ2 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC16.35■□□□□ 0.21
LRRC4CQ9HCJ2 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LRRC4CQ9HCJ2 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
LRRC4CQ9HCJ2 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC16.35■□□□□ 0.21
LRRC4CQ9HCJ2 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
LRRC4CQ9HCJ2 LINC01101-201ENST00000622953 1884 ntBASIC16.35■□□□□ 0.21
LRRC4CQ9HCJ2 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
LRRC4CQ9HCJ2 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LRRC4CQ9HCJ2 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC16.35■□□□□ 0.21
LRRC4CQ9HCJ2 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
LRRC4CQ9HCJ2 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC16.35■□□□□ 0.21
LRRC4CQ9HCJ2 AP001282.1-201ENST00000531301 1499 ntBASIC16.35■□□□□ 0.21
LRRC4CQ9HCJ2 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LRRC4CQ9HCJ2 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
LRRC4CQ9HCJ2 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
LRRC4CQ9HCJ2 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
LRRC4CQ9HCJ2 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
LRRC4CQ9HCJ2 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
LRRC4CQ9HCJ2 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
LRRC4CQ9HCJ2 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC16.34■□□□□ 0.21
LRRC4CQ9HCJ2 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
LRRC4CQ9HCJ2 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
LRRC4CQ9HCJ2 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC16.34■□□□□ 0.21
LRRC4CQ9HCJ2 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
LRRC4CQ9HCJ2 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
LRRC4CQ9HCJ2 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC16.34■□□□□ 0.21
LRRC4CQ9HCJ2 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
LRRC4CQ9HCJ2 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
LRRC4CQ9HCJ2 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC16.34■□□□□ 0.21
LRRC4CQ9HCJ2 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
LRRC4CQ9HCJ2 IMP4-203ENST00000409935 958 ntTSL 5 BASIC16.34■□□□□ 0.21
LRRC4CQ9HCJ2 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC16.34■□□□□ 0.21
LRRC4CQ9HCJ2 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
LRRC4CQ9HCJ2 VN2R19P-201ENST00000442399 1052 ntBASIC16.34■□□□□ 0.21
LRRC4CQ9HCJ2 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC16.34■□□□□ 0.21
LRRC4CQ9HCJ2 THTPA-204ENST00000554970 569 ntTSL 4 BASIC16.34■□□□□ 0.21
LRRC4CQ9HCJ2 THTPA-206ENST00000556015 535 ntTSL 3 BASIC16.34■□□□□ 0.21
LRRC4CQ9HCJ2 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC16.34■□□□□ 0.21
LRRC4CQ9HCJ2 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
LRRC4CQ9HCJ2 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
LRRC4CQ9HCJ2 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
LRRC4CQ9HCJ2 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
LRRC4CQ9HCJ2 AL390755.1-201ENST00000623716 2027 ntBASIC16.34■□□□□ 0.21
LRRC4CQ9HCJ2 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
LRRC4CQ9HCJ2 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
LRRC4CQ9HCJ2 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC16.34■□□□□ 0.21
LRRC4CQ9HCJ2 AC232323.1-201ENST00000540724 2099 ntBASIC16.34■□□□□ 0.21
LRRC4CQ9HCJ2 REXO1L5P-201ENST00000622260 2098 ntBASIC16.34■□□□□ 0.21
LRRC4CQ9HCJ2 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
LRRC4CQ9HCJ2 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC16.34■□□□□ 0.21
LRRC4CQ9HCJ2 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
LRRC4CQ9HCJ2 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC16.34■□□□□ 0.21
LRRC4CQ9HCJ2 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC16.34■□□□□ 0.21
LRRC4CQ9HCJ2 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
LRRC4CQ9HCJ2 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
LRRC4CQ9HCJ2 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
LRRC4CQ9HCJ2 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC16.33■□□□□ 0.21
LRRC4CQ9HCJ2 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
LRRC4CQ9HCJ2 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.21
LRRC4CQ9HCJ2 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC16.33■□□□□ 0.21
LRRC4CQ9HCJ2 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.21
LRRC4CQ9HCJ2 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC16.33■□□□□ 0.21
LRRC4CQ9HCJ2 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
LRRC4CQ9HCJ2 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
LRRC4CQ9HCJ2 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 82.5 ms