Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LRRC40Q9H9A6 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LRRC40Q9H9A6 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
LRRC40Q9H9A6 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC16.15■□□□□ 0.18
LRRC40Q9H9A6 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
LRRC40Q9H9A6 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LRRC40Q9H9A6 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LRRC40Q9H9A6 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
LRRC40Q9H9A6 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
LRRC40Q9H9A6 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
LRRC40Q9H9A6 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
LRRC40Q9H9A6 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
LRRC40Q9H9A6 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LRRC40Q9H9A6 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
LRRC40Q9H9A6 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LRRC40Q9H9A6 AC105250.1-201ENST00000509378 2057 ntBASIC16.14■□□□□ 0.17
LRRC40Q9H9A6 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC16.14■□□□□ 0.17
LRRC40Q9H9A6 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
LRRC40Q9H9A6 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LRRC40Q9H9A6 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
LRRC40Q9H9A6 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LRRC40Q9H9A6 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LRRC40Q9H9A6 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LRRC40Q9H9A6 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC16.14■□□□□ 0.17
LRRC40Q9H9A6 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC16.14■□□□□ 0.17
LRRC40Q9H9A6 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
LRRC40Q9H9A6 SPDYE14P-201ENST00000442619 822 ntBASIC16.14■□□□□ 0.17
LRRC40Q9H9A6 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC16.14■□□□□ 0.17
LRRC40Q9H9A6 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
LRRC40Q9H9A6 AC092865.5-201ENST00000545435 363 ntBASIC16.14■□□□□ 0.17
LRRC40Q9H9A6 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
LRRC40Q9H9A6 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC16.14■□□□□ 0.17
LRRC40Q9H9A6 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC16.14■□□□□ 0.17
LRRC40Q9H9A6 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
LRRC40Q9H9A6 FLJ16779-201ENST00000612722 7638 ntBASIC16.14■□□□□ 0.17
LRRC40Q9H9A6 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LRRC40Q9H9A6 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
LRRC40Q9H9A6 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
LRRC40Q9H9A6 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
LRRC40Q9H9A6 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC16.14■□□□□ 0.17
LRRC40Q9H9A6 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC16.14■□□□□ 0.17
LRRC40Q9H9A6 AC068418.2-201ENST00000577309 3703 ntBASIC16.14■□□□□ 0.17
LRRC40Q9H9A6 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
LRRC40Q9H9A6 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
LRRC40Q9H9A6 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC16.13■□□□□ 0.17
LRRC40Q9H9A6 AC092127.1-201ENST00000567093 3455 ntBASIC16.13■□□□□ 0.17
LRRC40Q9H9A6 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC16.13■□□□□ 0.17
LRRC40Q9H9A6 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
LRRC40Q9H9A6 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
LRRC40Q9H9A6 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC16.13■□□□□ 0.17
LRRC40Q9H9A6 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC16.13■□□□□ 0.17
LRRC40Q9H9A6 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
LRRC40Q9H9A6 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC16.13■□□□□ 0.17
LRRC40Q9H9A6 RPL30-202ENST00000396070 440 ntTSL 2 BASIC16.13■□□□□ 0.17
LRRC40Q9H9A6 FXR1-221ENST00000491674 365 ntTSL 2 BASIC16.13■□□□□ 0.17
LRRC40Q9H9A6 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC16.13■□□□□ 0.17
LRRC40Q9H9A6 BANF1P1-201ENST00000553684 263 ntBASIC16.13■□□□□ 0.17
LRRC40Q9H9A6 AC026150.2-201ENST00000564693 1156 ntBASIC16.13■□□□□ 0.17
LRRC40Q9H9A6 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC16.13■□□□□ 0.17
LRRC40Q9H9A6 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC16.13■□□□□ 0.17
LRRC40Q9H9A6 AC003101.2-201ENST00000612557 442 ntBASIC16.13■□□□□ 0.17
LRRC40Q9H9A6 AC007967.4-201ENST00000614700 386 ntBASIC16.13■□□□□ 0.17
LRRC40Q9H9A6 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
LRRC40Q9H9A6 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC16.13■□□□□ 0.17
LRRC40Q9H9A6 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC16.13■□□□□ 0.17
LRRC40Q9H9A6 DBET-201ENST00000630918 3363 ntBASIC16.13■□□□□ 0.17
LRRC40Q9H9A6 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
LRRC40Q9H9A6 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
LRRC40Q9H9A6 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
LRRC40Q9H9A6 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC16.13■□□□□ 0.17
LRRC40Q9H9A6 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC16.13■□□□□ 0.17
LRRC40Q9H9A6 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
LRRC40Q9H9A6 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC16.13■□□□□ 0.17
LRRC40Q9H9A6 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
LRRC40Q9H9A6 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
LRRC40Q9H9A6 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC16.12■□□□□ 0.17
LRRC40Q9H9A6 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
LRRC40Q9H9A6 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
LRRC40Q9H9A6 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
LRRC40Q9H9A6 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
LRRC40Q9H9A6 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
LRRC40Q9H9A6 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
LRRC40Q9H9A6 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
LRRC40Q9H9A6 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC16.12■□□□□ 0.17
LRRC40Q9H9A6 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
LRRC40Q9H9A6 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
LRRC40Q9H9A6 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
LRRC40Q9H9A6 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
LRRC40Q9H9A6 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
LRRC40Q9H9A6 AC090616.6-203ENST00000579186 1945 ntBASIC16.12■□□□□ 0.17
LRRC40Q9H9A6 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
LRRC40Q9H9A6 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC16.12■□□□□ 0.17
LRRC40Q9H9A6 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC16.12■□□□□ 0.17
LRRC40Q9H9A6 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
LRRC40Q9H9A6 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
LRRC40Q9H9A6 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
LRRC40Q9H9A6 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
LRRC40Q9H9A6 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
LRRC40Q9H9A6 RBM39-205ENST00000397370 612 ntTSL 2 BASIC16.12■□□□□ 0.17
LRRC40Q9H9A6 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms